Spata31d1d spermatogenesis associated 31 subfamily D, member 1D [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Spata31d1dprovided by MGI
Official Full Name: spermatogenesis associated 31 subfamily D, member 1Dprovided by MGI
Primary source: MGI:MGI:3045260
See related: Ensembl:ENSMUSG00000043986 AllianceGenome:MGI:3045260
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Fam75d1d; 4932411G14Rik
Summary: Orthologous to human SPATA31D1 (SPATA31 subfamily D member 1). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Restricted expression toward testis adult (RPKM 36.1) See more
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Genomic context

Location:: 13 B2; 13 31.87 cM

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	13	NC_000079.7 (59873739..59879566, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	13	NC_000079.6 (59725925..59731752, complement)

Chromosome 13 - NC_000079.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: putative spermatogenesis-associated protein 31D3

Names: family with sequence similarity 75, member D1D

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_177711.3 → NP_808379.2 putative spermatogenesis-associated protein 31D3

Status: VALIDATED

Source sequence(s)

AC134869, AK077018, BX631049

Consensus CDS

CCDS49286.1

UniProtKB/TrEMBL

E9Q5W2

Related

ENSMUSP00000128200.2, ENSMUST00000052978.6

Conserved Domains (2) summary

pfam14650
Location:383 → 731

FAM75; FAM75 family

pfam15371
Location:72 → 144

DUF4599; Domain of unknown function (DUF4599)