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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001308150.2 → NP_001295079.1 proton-coupled amino acid transporter 1 isoform b
See identical proteins and their annotated locations for NP_001295079.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate 3' terminal exon, resulting in a shorter 3' coding region and alternate 3' UTR, compared to variant 1. The encoded isoform (b) is shorter at the C-terminus, compared to isoform a.
- Source sequence(s)
-
AY162213, AY227111, BM787446
- Consensus CDS
-
CCDS83035.1
- UniProtKB/TrEMBL
-
E7EW39
- Related
- ENSP00000430305.1, ENST00000521925.5
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 386
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
NM_001308151.2 → NP_001295080.1 proton-coupled amino acid transporter 1 isoform c
See identical proteins and their annotated locations for NP_001295080.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an alternate 5' terminal exon and it thus differs in the 5' UTR, and it also lacks several 3' exons but contains alternate 3' exon structure, thereby differing in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (c) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AK057340, AY227113
- Consensus CDS
-
CCDS78073.1
- Related
- ENSP00000395640.2, ENST00000429484.6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 243
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
NM_001349740.2 → NP_001336669.1 proton-coupled amino acid transporter 1 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) contains an alternate exon in its 5' coding region, resulting in use of an alternate start codon, and a longer 5' UTR, compared to variant 1. The encoded isoform (d) has a shorter and distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AC034205, AL833703, AY162213, BC136438, BM787446
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:52 → 425
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
NM_078483.4 → NP_510968.2 proton-coupled amino acid transporter 1 isoform a
See identical proteins and their annotated locations for NP_510968.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AL833703, AY162213, BC136438, BM787446
- Consensus CDS
-
CCDS4316.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Related
- ENSP00000243389.3, ENST00000243389.8
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
151344596..151556085
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011537591.2 → XP_011535893.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535893.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_047416924.1 → XP_047272880.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_011537585.1 → XP_011535887.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535887.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Related
- ENSP00000428140.1, ENST00000520701.5
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_017009217.2 → XP_016864706.1 proton-coupled amino acid transporter 1 isoform X7
- UniProtKB/TrEMBL
-
E7EW39
-
XM_011537581.2 → XP_011535883.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535883.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_047416923.1 → XP_047272879.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_011537590.2 → XP_011535892.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535892.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_011537587.4 → XP_011535889.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535889.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_011537584.3 → XP_011535886.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535886.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_011537592.3 → XP_011535894.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535894.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_011537580.3 → XP_011535882.1 proton-coupled amino acid transporter 1 isoform X2
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:53 → 459
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_011537589.4 → XP_011535891.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535891.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_047416928.1 → XP_047272884.1 proton-coupled amino acid transporter 1 isoform X8
- UniProtKB/TrEMBL
-
E7EW39
-
XM_011537586.3 → XP_011535888.1 proton-coupled amino acid transporter 1 isoform X3
See identical proteins and their annotated locations for XP_011535888.1
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_017009216.2 → XP_016864705.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:47 → 453
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
XM_047416921.1 → XP_047272877.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_047416925.1 → XP_047272881.1 proton-coupled amino acid transporter 1 isoform X4
- UniProtKB/TrEMBL
-
E7EW39
-
XM_011537595.3 → XP_011535897.3 proton-coupled amino acid transporter 1 isoform X5
- UniProtKB/TrEMBL
-
E7EW39
-
XM_047416920.1 → XP_047272876.1 proton-coupled amino acid transporter 1 isoform X1
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_047416927.1 → XP_047272883.1 proton-coupled amino acid transporter 1 isoform X6
- UniProtKB/TrEMBL
-
E7EW39
-
XM_011537596.3 → XP_011535898.3 proton-coupled amino acid transporter 1 isoform X10
-
XM_047416929.1 → XP_047272885.1 proton-coupled amino acid transporter 1 isoform X11
-
XM_006714759.5 → XP_006714822.1 proton-coupled amino acid transporter 1 isoform X9
- UniProtKB/TrEMBL
-
D2Y3F6
- Conserved Domains (1) summary
-
- cl00456
Location:2 → 375
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
151883565..152095073
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054352033.1 → XP_054208008.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352036.1 → XP_054208011.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352027.1 → XP_054208002.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352030.1 → XP_054208005.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352040.1 → XP_054208015.1 proton-coupled amino acid transporter 1 isoform X7
- UniProtKB/TrEMBL
-
E7EW39
-
XM_054352025.1 → XP_054208000.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352043.1 → XP_054208018.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352031.1 → XP_054208006.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352032.1 → XP_054208007.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352034.1 → XP_054208009.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352029.1 → XP_054208004.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352028.1 → XP_054208003.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352024.1 → XP_054207999.1 proton-coupled amino acid transporter 1 isoform X2
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352041.1 → XP_054208016.1 proton-coupled amino acid transporter 1 isoform X8
- UniProtKB/TrEMBL
-
E7EW39
-
XM_054352035.1 → XP_054208010.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352026.1 → XP_054208001.1 proton-coupled amino acid transporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C9JI34, Q1LZ56, Q7Z2H8, Q7Z7C0, Q86YK4, Q96M74
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352037.1 → XP_054208012.1 proton-coupled amino acid transporter 1 isoform X4
- UniProtKB/TrEMBL
-
E7EW39
-
XM_054352038.1 → XP_054208013.1 proton-coupled amino acid transporter 1 isoform X5
- UniProtKB/TrEMBL
-
E7EW39
-
XM_054352023.1 → XP_054207998.1 proton-coupled amino acid transporter 1 isoform X1
- UniProtKB/TrEMBL
-
D2Y3F6
-
XM_054352039.1 → XP_054208014.1 proton-coupled amino acid transporter 1 isoform X6
- UniProtKB/TrEMBL
-
E7EW39
-
XM_054352044.1 → XP_054208019.1 proton-coupled amino acid transporter 1 isoform X10
-
XM_054352045.1 → XP_054208020.1 proton-coupled amino acid transporter 1 isoform X11
-
XM_054352042.1 → XP_054208017.1 proton-coupled amino acid transporter 1 isoform X9
- UniProtKB/TrEMBL
-
D2Y3F6