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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_016739.2 RefSeqGene
- Range
-
5000..66249
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001172732.2 → NP_001166203.2 retinoic acid-induced protein 2 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and lacks a segment in the coding region, compared to variant 1. The resulting protein (isoform 2) is shorter than isoform 1.
- Source sequence(s)
-
Z93242, Z93929
- Consensus CDS
-
CCDS55374.1
- UniProtKB/TrEMBL
-
B3KPD7
- Related
- ENSP00000392578.2, ENST00000415486.7
-
NM_001172739.2 → NP_001166210.2 retinoic acid-induced protein 2 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same isoform (1).
- Source sequence(s)
-
Z93242, Z93929
- Consensus CDS
-
CCDS14183.1
- UniProtKB/Swiss-Prot
- B1B1K2, B4DQM9, E7EMN4, Q8N6X7, Q9Y5P3
- UniProtKB/TrEMBL
-
B3KPD7
- Related
- ENSP00000333456.1, ENST00000331511.5
-
NM_001172743.2 → NP_001166214.2 retinoic acid-induced protein 2 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform. Variants 1, 2 and 3 encode the same isoform (1).
- Source sequence(s)
-
Z93242, Z93929
- Consensus CDS
-
CCDS14183.1
- UniProtKB/Swiss-Prot
- B1B1K2, B4DQM9, E7EMN4, Q8N6X7, Q9Y5P3
- UniProtKB/TrEMBL
-
B3KPD7
- Related
- ENSP00000444210.1, ENST00000545871.1
-
NM_021785.6 → NP_068557.4 retinoic acid-induced protein 2 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same isoform (1).
- Source sequence(s)
-
Z93242, Z93929
- Consensus CDS
-
CCDS14183.1
- UniProtKB/Swiss-Prot
- B1B1K2, B4DQM9, E7EMN4, Q8N6X7, Q9Y5P3
- UniProtKB/TrEMBL
-
B3KPD7
- Related
- ENSP00000401323.1, ENST00000451717.6
RNA
-
NR_033348.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) has an alternate 5' exon, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
Z93242, Z93929
-
NR_033349.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) contains an alternate 5' exon and lacks an internal exon, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
Z93242, Z93929
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
17800049..17861298 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006724460.2 → XP_006724523.1 retinoic acid-induced protein 2 isoform X1
See identical proteins and their annotated locations for XP_006724523.1
- UniProtKB/Swiss-Prot
- B1B1K2, B4DQM9, E7EMN4, Q8N6X7, Q9Y5P3
- UniProtKB/TrEMBL
-
B3KPD7
-
XM_006724459.3 → XP_006724522.1 retinoic acid-induced protein 2 isoform X1
See identical proteins and their annotated locations for XP_006724522.1
- UniProtKB/Swiss-Prot
- B1B1K2, B4DQM9, E7EMN4, Q8N6X7, Q9Y5P3
- UniProtKB/TrEMBL
-
B3KPD7
-
XM_011545441.3 → XP_011543743.1 retinoic acid-induced protein 2 isoform X1
See identical proteins and their annotated locations for XP_011543743.1
- UniProtKB/Swiss-Prot
- B1B1K2, B4DQM9, E7EMN4, Q8N6X7, Q9Y5P3
- UniProtKB/TrEMBL
-
B3KPD7
-
XM_011545439.3 → XP_011543741.1 retinoic acid-induced protein 2 isoform X1
See identical proteins and their annotated locations for XP_011543741.1
- UniProtKB/Swiss-Prot
- B1B1K2, B4DQM9, E7EMN4, Q8N6X7, Q9Y5P3
- UniProtKB/TrEMBL
-
B3KPD7
-
XM_047441788.1 → XP_047297744.1 retinoic acid-induced protein 2 isoform X1
- UniProtKB/Swiss-Prot
- B1B1K2, B4DQM9, E7EMN4, Q8N6X7, Q9Y5P3
- UniProtKB/TrEMBL
-
B3KPD7
- Related
- ENSP00000353106.1, ENST00000360011.5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
17382656..17443905 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054326397.1 → XP_054182372.1 retinoic acid-induced protein 2 isoform X1
- UniProtKB/TrEMBL
-
B3KPD7
-
XM_054326396.1 → XP_054182371.1 retinoic acid-induced protein 2 isoform X1
- UniProtKB/TrEMBL
-
B3KPD7
-
XM_054326398.1 → XP_054182373.1 retinoic acid-induced protein 2 isoform X1
- UniProtKB/TrEMBL
-
B3KPD7
-
XM_054326395.1 → XP_054182370.1 retinoic acid-induced protein 2 isoform X1
- UniProtKB/TrEMBL
-
B3KPD7
-
XM_054326394.1 → XP_054182369.1 retinoic acid-induced protein 2 isoform X1
- UniProtKB/TrEMBL
-
B3KPD7