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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_052859.1 RefSeqGene
- Range
-
5023..99459
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001143779.2 → NP_001137251.1 intraflagellar transport protein 81 homolog isoform 1
See identical proteins and their annotated locations for NP_001137251.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1 and 3 both encode isoform 1.
- Source sequence(s)
-
AF139540, BP351086
- Consensus CDS
-
CCDS41831.1
- UniProtKB/Swiss-Prot
- Q2YDY1, Q8NB51, Q8WYA0, Q9BSV2, Q9UNY8
- UniProtKB/TrEMBL
-
A8K4S8
- Related
- ENSP00000449718.1, ENST00000552912.5
- Conserved Domains (2) summary
-
- TIGR02168
Location:224 → 555
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR03752
Location:170 → 250
- conj_TIGR03752; integrating conjugative element protein, PFL_4705 family
-
NM_001347946.2 → NP_001334875.1 intraflagellar transport protein 81 homolog isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (4), as well as variant 2, encodes isoform 2.
- Source sequence(s)
-
AC007546
- Consensus CDS
-
CCDS9142.1
- UniProtKB/TrEMBL
-
F8W1J4
- Related
- ENSP00000446950.1, ENST00000546374.5
- Conserved Domains (1) summary
-
- cl25732
Location:169 → 388
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001347947.2 → NP_001334876.1 intraflagellar transport protein 81 homolog isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), as well as variant 6, encodes isoform 3.
- Source sequence(s)
-
AC007546, AC009730
- Conserved Domains (1) summary
-
- cl25732
Location:30 → 312
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001347948.2 → NP_001334877.1 intraflagellar transport protein 81 homolog isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), as well as variant 5, encodes isoform 3.
- Source sequence(s)
-
AC007546, AC009730
- Conserved Domains (1) summary
-
- cl25732
Location:30 → 312
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_014055.4 → NP_054774.2 intraflagellar transport protein 81 homolog isoform 1
See identical proteins and their annotated locations for NP_054774.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1 and 3 both encode isoform 1.
- Source sequence(s)
-
AF332010, BP351086
- Consensus CDS
-
CCDS41831.1
- UniProtKB/Swiss-Prot
- Q2YDY1, Q8NB51, Q8WYA0, Q9BSV2, Q9UNY8
- UniProtKB/TrEMBL
-
A8K4S8
- Related
- ENSP00000242591.5, ENST00000242591.10
- Conserved Domains (2) summary
-
- TIGR02168
Location:224 → 555
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR03752
Location:170 → 250
- conj_TIGR03752; integrating conjugative element protein, PFL_4705 family
-
NM_031473.4 → NP_113661.2 intraflagellar transport protein 81 homolog isoform 2
See identical proteins and their annotated locations for NP_113661.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1. Variants 2 and 4 both encode isoform 2.
- Source sequence(s)
-
AC007546, AF332010, BC108257, BP351086
- Consensus CDS
-
CCDS9142.1
- UniProtKB/TrEMBL
-
F8W1J4
- Related
- ENSP00000355372.4, ENST00000361948.8
- Conserved Domains (1) summary
-
- cl25732
Location:169 → 388
- SMC_N; RecF/RecN/SMC N terminal domain
RNA
-
NR_144949.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC007546, AC009730
-
NR_144950.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC007546, AC009730
-
NR_144951.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC007546, AC009730
-
NR_144952.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC007546, AC009730
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
110124357..110218793
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017019217.2 → XP_016874706.1 intraflagellar transport protein 81 homolog isoform X1
- UniProtKB/Swiss-Prot
- Q2YDY1, Q8NB51, Q8WYA0, Q9BSV2, Q9UNY8
- UniProtKB/TrEMBL
-
A8K4S8
- Conserved Domains (2) summary
-
- TIGR02168
Location:224 → 555
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR03752
Location:170 → 250
- conj_TIGR03752; integrating conjugative element protein, PFL_4705 family
RNA
-
XR_007063070.1 RNA Sequence
-
XR_001748670.3 RNA Sequence
-
XR_944523.4 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
110100094..110196424
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054371853.1 → XP_054227828.1 intraflagellar transport protein 81 homolog isoform X1
- UniProtKB/Swiss-Prot
- Q2YDY1, Q8NB51, Q8WYA0, Q9BSV2, Q9UNY8
- UniProtKB/TrEMBL
-
A8K4S8
RNA
-
XR_008488568.1 RNA Sequence
-
XR_008488570.1 RNA Sequence
-
XR_008488569.1 RNA Sequence