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    LOC101927468 uncharacterized LOC101927468 [ Homo sapiens (human) ]

    Gene ID: 101927468, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC101927468
    Gene description
    uncharacterized LOC101927468
    See related
    Ensembl:ENSG00000227733
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in brain (RPKM 1.2), endometrium (RPKM 0.9) and 19 other tissues See more
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    Genomic context

    See LOC101927468 in Genome Data Viewer
    Location:
    1q21.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (148208093..148247071, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (146560353..146599329)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147680370..147719342, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2805 Neighboring gene RNA, 5S ribosomal pseudogene 57 Neighboring gene NANOG hESC enhancer GRCh37_chr1:147691416-147691917 Neighboring gene NANOG hESC enhancer GRCh37_chr1:147710223-147710724 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:147735767-147736426 Neighboring gene Sharpr-MPRA regulatory region 3868 Neighboring gene tRNA-Gln (anticodon CTG) 4-1 Neighboring gene RNA, variant U1 small nuclear 22

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    General gene information

    Clone Names

    • FLJ34369

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables triplet codon-amino acid adaptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_120331.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC239809
      Related
      ENST00000658395.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      148208093..148247071 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      146560353..146599329
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)