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    ZNF800 zinc finger protein 800 [ Homo sapiens (human) ]

    Gene ID: 168850, updated on 10-Dec-2024

    Summary

    Official Symbol
    ZNF800provided by HGNC
    Official Full Name
    zinc finger protein 800provided by HGNC
    Primary source
    HGNC:HGNC:27267
    See related
    Ensembl:ENSG00000048405 MIM:621007; AllianceGenome:HGNC:27267
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to act upstream of or within acinar cell differentiation and endocrine pancreas development. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in bone marrow (RPKM 4.8), testis (RPKM 2.3) and 25 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See ZNF800 in Genome Data Viewer
    Location:
    7q31.33
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (127342859..127392708, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (128658405..128706384, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (127010097..127032762, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene glutamate metabotropic receptor 8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26582 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18590 Neighboring gene GRM8 antisense RNA 1 Neighboring gene PRELI domain containing 3B pseudogene 10 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18591 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:127032217-127032717 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18593 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26584 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26585 Neighboring gene uncharacterized LOC105375490 Neighboring gene long intergenic non-protein coding RNA 3012 Neighboring gene VISTA enhancer hs1308 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:127223080-127224279 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:127224999-127225998 Neighboring gene GRIP and coiled-coil domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Interactions

    General gene information

    Clone Names

    • FLJ43301, MGC130032, MGC130033

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables DNA binding  
    enables DNA-binding transcription factor activity PubMed 
    enables metal ion binding  
    Component Evidence Code Pubs
    located_in nucleus  

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_176814.5NP_789784.2  zinc finger protein 800

      See identical proteins and their annotated locations for NP_789784.2

      Status: VALIDATED

      Source sequence(s)
      AK309674, BC110623, BG112338, BU581251, DA888007
      Consensus CDS
      CCDS5795.1
      UniProtKB/Swiss-Prot
      Q2TB10, Q9HBN0
      UniProtKB/TrEMBL
      B7Z4V7
      Related
      ENSP00000265827.3, ENST00000265827.8
      Conserved Domains (4) summary
      sd00019
      Location:488508
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:618640
      zf-C2H2; Zinc finger, C2H2 type
      pfam16622
      Location:355383
      zf-C2H2_11; zinc-finger C2H2-type
      pfam16624
      Location:391485
      zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      127342859..127392708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011515859.4XP_011514161.1  zinc finger protein 800 isoform X1

      See identical proteins and their annotated locations for XP_011514161.1

      Conserved Domains (4) summary
      sd00019
      Location:488508
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:618640
      zf-C2H2; Zinc finger, C2H2 type
      pfam16622
      Location:355383
      zf-C2H2_11; zinc-finger C2H2-type
      pfam16624
      Location:391485
      zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
    2. XM_047419942.1XP_047275898.1  zinc finger protein 800 isoform X2

      UniProtKB/TrEMBL
      B7Z4V7
    3. XM_006715868.5XP_006715931.1  zinc finger protein 800 isoform X1

      See identical proteins and their annotated locations for XP_006715931.1

      Conserved Domains (4) summary
      sd00019
      Location:488508
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:618640
      zf-C2H2; Zinc finger, C2H2 type
      pfam16622
      Location:355383
      zf-C2H2_11; zinc-finger C2H2-type
      pfam16624
      Location:391485
      zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
    4. XM_006715869.5XP_006715932.1  zinc finger protein 800 isoform X2

      UniProtKB/TrEMBL
      B7Z4V7
      Conserved Domains (4) summary
      sd00019
      Location:456476
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:586608
      zf-C2H2; Zinc finger, C2H2 type
      pfam16622
      Location:323351
      zf-C2H2_11; zinc-finger C2H2-type
      pfam16624
      Location:359453
      zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
    5. XM_006715867.5XP_006715930.1  zinc finger protein 800 isoform X1

      See identical proteins and their annotated locations for XP_006715930.1

      Conserved Domains (4) summary
      sd00019
      Location:488508
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:618640
      zf-C2H2; Zinc finger, C2H2 type
      pfam16622
      Location:355383
      zf-C2H2_11; zinc-finger C2H2-type
      pfam16624
      Location:391485
      zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
    6. XM_047419941.1XP_047275897.1  zinc finger protein 800 isoform X1

    7. XM_047419949.1XP_047275905.1  zinc finger protein 800 isoform X6

      UniProtKB/TrEMBL
      B7Z4V7
    8. XM_047419946.1XP_047275902.1  zinc finger protein 800 isoform X4

      UniProtKB/TrEMBL
      B7Z4V7
    9. XM_047419945.1XP_047275901.1  zinc finger protein 800 isoform X4

      UniProtKB/TrEMBL
      B7Z4V7
    10. XM_047419943.1XP_047275899.1  zinc finger protein 800 isoform X3

      UniProtKB/Swiss-Prot
      Q2TB10, Q9HBN0
      UniProtKB/TrEMBL
      B7Z4V7
      Related
      ENSP00000376988.1, ENST00000393312.5
    11. XM_047419948.1XP_047275904.1  zinc finger protein 800 isoform X5

      UniProtKB/TrEMBL
      B7Z4V7
    12. XM_005250181.5XP_005250238.1  zinc finger protein 800 isoform X3

      See identical proteins and their annotated locations for XP_005250238.1

      UniProtKB/Swiss-Prot
      Q2TB10, Q9HBN0
      UniProtKB/TrEMBL
      B7Z4V7
      Related
      ENSP00000376989.1, ENST00000393313.5
      Conserved Domains (4) summary
      sd00019
      Location:488508
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:618640
      zf-C2H2; Zinc finger, C2H2 type
      pfam16622
      Location:355383
      zf-C2H2_11; zinc-finger C2H2-type
      pfam16624
      Location:391485
      zf-C2H2_assoc2; Unstructured region upstream of a zinc-finger
    13. XM_047419947.1XP_047275903.1  zinc finger protein 800 isoform X5

      UniProtKB/TrEMBL
      B7Z4V7
    14. XM_047419944.1XP_047275900.1  zinc finger protein 800 isoform X3

      UniProtKB/Swiss-Prot
      Q2TB10, Q9HBN0
      UniProtKB/TrEMBL
      B7Z4V7

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      128658405..128706384 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054357402.1XP_054213377.1  zinc finger protein 800 isoform X1

    2. XM_054357405.1XP_054213380.1  zinc finger protein 800 isoform X2

      UniProtKB/TrEMBL
      B7Z4V7
    3. XM_054357401.1XP_054213376.1  zinc finger protein 800 isoform X1

    4. XM_054357403.1XP_054213378.1  zinc finger protein 800 isoform X1

    5. XM_054357404.1XP_054213379.1  zinc finger protein 800 isoform X2

      UniProtKB/TrEMBL
      B7Z4V7
    6. XM_054357400.1XP_054213375.1  zinc finger protein 800 isoform X1

    7. XM_054357413.1XP_054213388.1  zinc finger protein 800 isoform X6

      UniProtKB/TrEMBL
      B7Z4V7
    8. XM_054357410.1XP_054213385.1  zinc finger protein 800 isoform X4

      UniProtKB/TrEMBL
      B7Z4V7
    9. XM_054357407.1XP_054213382.1  zinc finger protein 800 isoform X3

      UniProtKB/Swiss-Prot
      Q2TB10, Q9HBN0
      UniProtKB/TrEMBL
      B7Z4V7
    10. XM_054357412.1XP_054213387.1  zinc finger protein 800 isoform X5

      UniProtKB/TrEMBL
      B7Z4V7
    11. XM_054357406.1XP_054213381.1  zinc finger protein 800 isoform X3

      UniProtKB/Swiss-Prot
      Q2TB10, Q9HBN0
      UniProtKB/TrEMBL
      B7Z4V7
    12. XM_054357409.1XP_054213384.1  zinc finger protein 800 isoform X4

      UniProtKB/TrEMBL
      B7Z4V7
    13. XM_054357408.1XP_054213383.1  zinc finger protein 800 isoform X3

      UniProtKB/Swiss-Prot
      Q2TB10, Q9HBN0
      UniProtKB/TrEMBL
      B7Z4V7
    14. XM_054357411.1XP_054213386.1  zinc finger protein 800 isoform X5

      UniProtKB/TrEMBL
      B7Z4V7
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