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    nirJ heme d1 biosynthesis protein NirJ [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879503, updated on 24-Aug-2024

    Summary

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    Gene symbol
    nirJ
    Gene description
    heme d1 biosynthesis protein NirJ
    Locus tag
    PA0511
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (573433..574596, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase Neighboring gene cytochrome C Neighboring gene uroporphyrin-III C-methyltransferase Neighboring gene heme d1 biosynthesis protein NirH Neighboring gene heme d1 biosynthesis protein NirG Neighboring gene heme d1 biosynthesis protein NirL Neighboring gene heme d1 biosynthesis protein NirD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene cluster for dissimilatory nitrite reductase (nir) from Pseudomonas aeruginosa: sequencing and identification of a locus for heme d1 biosynthesis. Kawasaki S, et al. J Bacteriol, 1997 Jan. PMID 8982003, Free PMC Article
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within heme biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heme d1 biosynthesis protein NirJ
    NP_249202.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      573433..574596 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249202.1 heme d1 biosynthesis protein NirJ [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249202.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A367M4Y8
      Conserved Domains (1) summary
      TIGR04051
      Location:26 → 378
      rSAM_NirJ; heme d1 biosynthesis radical SAM protein NirJ
    Nucleotide Protein
    Heading Accession and Version

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