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    4921533I20Rik Riken cDNA 4921533I20 gene [ Mus musculus (house mouse) ]

    Gene ID: 664619, updated on 9-Dec-2024

    Summary

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    Official Symbol
    4921533I20Rikprovided by MGI
    Official Full Name
    Riken cDNA 4921533I20 geneprovided by MGI
    Primary source
    MGI:MGI:3613759
    See related
    Ensembl:ENSMUSG00000117460 AllianceGenome:MGI:3613759
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Is expressed in brain; retina; and spinal cord. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See 4921533I20Rik in Genome Data Viewer
    Location:
    18 A1; 18 10.53 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (17367540..17368539, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (17234483..17235482, complement)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700001G01 gene Neighboring gene predicted gene, 22470 Neighboring gene predicted gene, 41674 Neighboring gene STARR-seq mESC enhancer starr_43917 Neighboring gene STARR-seq mESC enhancer starr_43918 Neighboring gene predicted gene, 30960 Neighboring gene STARR-seq mESC enhancer starr_43919 Neighboring gene integrin beta 1 (fibronectin receptor beta) pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. McKee AE, et al. BMC Dev Biol, 2005 Jul 20. PMID 16033648, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • PRP18 pre-mRNA processing factor 18 homolog pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033607.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC124548
      Related
      ENSMUST00000234739.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      17367540..17368539 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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