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    CG4558 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31631, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG4558provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0029914
    Locus tag
    Dmel_CG4558
    See related
    AllianceGenome:FB:FBgn0029914
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG4558
    Summary
    Is expressed in organism. Orthologous to human C6orf89 (chromosome 6 open reading frame 89). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG4558 in Genome Data Viewer
    Location:
    6D6-6D7; 1-18 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6849770..6851884)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6743803..6745917)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene TATA element modulatory factor Neighboring gene Chitinase 11 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45531 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The nonsense-mediated decay pathway maintains synapse architecture and synaptic vesicle cycle efficacy. Long AA, et al. J Cell Sci, 2010 Oct 1. PMID 20826458, Free PMC Article
    2. Cluster-Based Analysis of Retinitis Pigmentosa Modifiers Using Drosophila Eye Size and Gene Expression Data. Amstutz J, et al. Genes (Basel), 2022 Feb 21. PMID 35205430, Free PMC Article
    3. Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing. Mazloomian A, et al. RNA Biol, 2015. PMID 26512413, Free PMC Article
    4. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG4558-PA
    CG4558-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      6849770..6851884
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132134.4 → NP_572362.1  uncharacterized protein Dmel_CG4558, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572362.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95RD4, Q9W3V0
      Related
      FBpp0070955

    2. NM_001169212.2 → NP_001162683.1  uncharacterized protein Dmel_CG4558, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001162683.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JJF2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1JJF2 E1JJF2
    Q9W3V0 Q9W3V0

    Gene LinkOut

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