U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Trs33 TRAPP subunit 33 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41866, updated on 9-Dec-2024

    Summary

    Official Symbol
    Trs33provided by FlyBase
    Official Full Name
    TRAPP subunit 33provided by FlyBase
    Primary source
    FLYBASE:FBgn0266722
    Locus tag
    Dmel_CG6196
    See related
    AllianceGenome:FB:FBgn0266722
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH37427; CG6196; Dmel\CG6196; dTrs33; TRAPPC6; Trs33p
    Summary
    Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Part of TRAPPII protein complex and TRAPPIII protein complex. Used to study neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy. Orthologous to several human genes including TRAPPC6B (trafficking protein particle complex subunit 6B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Trs33 in Genome Data Viewer
    Location:
    88F1-88F1; 3-57 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15350345..15350995, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11176067..11176717, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Surfeit 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene Autophagy-related 4b Neighboring gene 3-hydroxyisobutyryl-CoA hydrolase Neighboring gene Component of oligomeric golgi complex 2

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in Golgi vesicle transport IC
    Inferred by Curator
    more info
    PubMed 
    involved_in Golgi vesicle transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of TRAPP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of TRAPP complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    part_of TRAPPII protein complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of TRAPPIII protein complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cis-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in trans-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    TRAPP subunit 33
    Names
    CG6196-PA
    TRAPP subunit 33 ortholog
    Trs33-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      15350345..15350995 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142193.4NP_650450.1  TRAPP subunit 33 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650450.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VF82
      Related
      FBpp0082570
      Conserved Domains (1) summary
      cd14944
      Location:4150
      TRAPPC6A_Trs33; Trs33 subunit of the TRAPP complex