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    CG15014 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38533, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15014provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035532
    Locus tag
    Dmel_CG15014
    See related
    AllianceGenome:FB:FBgn0035532
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15014
    Summary
    Predicted to enable RNA binding activity. Predicted to be involved in tRNA modification. Orthologous to human THUMPD1 (THUMP domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15014 in Genome Data Viewer
    Location:
    64B1-64B1; 3-12 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (4321105..4322259, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (4321105..4322259, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene dusky-like Neighboring gene claspin Neighboring gene Peroxisomal Membrane Protein 34 Neighboring gene Cdc42-interacting protein 4 Neighboring gene long non-coding RNA:CR45156 Neighboring gene mitochondrial ribosomal protein S6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Laser microdissection of sensory organ precursor cells of Drosophila microchaetes. Buffin E, et al. PLoS One, 2010 Feb 19. PMID 20174573, Free PMC Article
    2. THUMP--a predicted RNA-binding domain shared by 4-thiouridine, pseudouridine synthases and RNA methylases. Aravind L, et al. Trends Biochem Sci, 2001 Apr. PMID 11295541
    3. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. Phanse S, et al. Data Brief, 2016 Mar. PMID 26870755, Free PMC Article
    4. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in tRNA modification IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in tRNA modification IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15014-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      4321105..4322259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139635.2 → NP_647892.1  uncharacterized protein Dmel_CG15014 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647892.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VZD8
      Related
      FBpp0073196
      Conserved Domains (1) summary
      cd11717
      Location:123 → 260
      THUMP_THUMPD1_like; THUMP domain-containing protein 1-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VZD8.2 Q9VZD8

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