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    CG13895 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38087, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13895provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035158
    Locus tag
    Dmel_CG13895
    See related
    AllianceGenome:FB:FBgn0035158
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13895
    Summary
    Predicted to enable DNA binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13895 in Genome Data Viewer
    Location:
    61C8-61C8; 3-0.5 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (705948..708205, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (705948..708205, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44514 Neighboring gene CKII-alpha subunit interactor-3 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Jerky/Earthbound facilitates cell-specific Wnt/Wingless signalling by modulating β-catenin-TCF activity. Benchabane H, et al. EMBO J, 2011 Apr 20. PMID 21399610, Free PMC Article
    2. A genetic in vivo system to detect asymmetrically distributed RNA. JayaNandanan N, et al. EMBO Rep, 2011 Oct 28. PMID 21921935, Free PMC Article
    3. Microarray analysis of replicate populations selected against a wing-shape correlation in Drosophila melanogaster. Weber KE, et al. Genetics, 2008 Feb. PMID 18245369, Free PMC Article
    4. Perturbation analysis of heterochromatin-mediated gene silencing and somatic inheritance. Schneiderman JI, et al. PLoS Genet, 2010 Sep 9. PMID 20838586, Free PMC Article
    5. Evidence for tissue-specific Jak/STAT target genes in Drosophila optic lobe development. Wang H, et al. Genetics, 2013 Dec. PMID 24077308, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13895-PA
    CG13895-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      705948..708205 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_138211.4 → NP_612055.3  uncharacterized protein Dmel_CG13895, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_612055.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SYG6, Q9W0N4
      Related
      FBpp0072501
      Conserved Domains (2) summary
      smart00674
      Location:86 → 152
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      cl21459
      Location:17 → 67
      HTH; Helix-turn-helix domains

    2. NM_001274291.1 → NP_001261220.1  uncharacterized protein Dmel_CG13895, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261220.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PDR6, Q8SYG6
      Conserved Domains (2) summary
      smart00674
      Location:93 → 159
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      cl21459
      Location:24 → 74
      HTH; Helix-turn-helix domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PDR6 M9PDR6
    Q8SYG6 Q8SYG6
    Q9W0N4 Q9W0N4

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