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    Zfp956 zinc finger protein 956 [ Mus musculus (house mouse) ]

    Gene ID: 101197, updated on 27-Nov-2024

    Summary

    Official Symbol
    Zfp956provided by MGI
    Official Full Name
    zinc finger protein 956provided by MGI
    Primary source
    MGI:MGI:2141515
    See related
    Ensembl:ENSMUSG00000045466 AllianceGenome:MGI:2141515
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in early conceptus; inner cell mass; and oocyte. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in testis adult (RPKM 28.3), thymus adult (RPKM 11.9) and 27 other tissues See more
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    Genomic context

    See Zfp956 in Genome Data Viewer
    Location:
    6 B2.3; 6 22.94 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (47930324..47942234)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (47953390..47965300)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 282 Neighboring gene predicted gene, 52899 Neighboring gene Zinc finger protein 212 Neighboring gene zinc finger protein 783 Neighboring gene STARR-positive B cell enhancer ABC_E8099 Neighboring gene nuclear encoded tRNA cysteine 57 (anticodon GCA) Neighboring gene ribosomal protein S2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General protein information

    Preferred Names
    uncharacterized protein LOC101197

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178898.4NP_849229.2  uncharacterized protein LOC101197

      See identical proteins and their annotated locations for NP_849229.2

      Status: VALIDATED

      Source sequence(s)
      AK045736, AK133549, BC096536
      Consensus CDS
      CCDS20101.2
      UniProtKB/TrEMBL
      Q3UZY6, Q8BR38
      Related
      ENSMUSP00000098989.5, ENSMUST00000101445.11
      Conserved Domains (8) summary
      cd07765
      Location:129168
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      smart00349
      Location:129188
      KRAB; krueppel associated box
      COG5048
      Location:276483
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:327347
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:467487
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:325347
      zf-C2H2; Zinc finger, C2H2 type
      pfam12417
      Location:4498
      DUF3669; Zinc finger protein
      pfam13465
      Location:396420
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      47930324..47942234
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)