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    Mir205hg Mir205 host gene [ Mus musculus (house mouse) ]

    Gene ID: 70800, updated on 2-Nov-2024

    Summary

    Official Symbol
    Mir205hgprovided by MGI
    Official Full Name
    Mir205 host geneprovided by MGI
    Primary source
    MGI:MGI:1918050
    See related
    Ensembl:ENSMUSG00000097850 AllianceGenome:MGI:1918050
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4631405K08Rik
    Summary
    Involved in several processes, including hormone biosynthetic process; prolactin metabolic process; and regulation of DNA-binding transcription factor activity. Is expressed in several structures, including alimentary system; branchial arch; future brain; nose; and respiratory system. Orthologous to human MIR205HG (MIR205 host gene). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in bladder adult (RPKM 4.3), limb E14.5 (RPKM 1.5) and 4 other tissues See more
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    Genomic context

    See Mir205hg in Genome Data Viewer
    Location:
    1 H6; 1 97.82 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (193188768..193192518, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (193506460..193510210, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_03475 Neighboring gene STARR-seq mESC enhancer starr_03476 Neighboring gene predicted gene, 38022 Neighboring gene predicted gene, 31753 Neighboring gene STARR-seq mESC enhancer starr_03477 Neighboring gene STARR-seq mESC enhancer starr_03480 Neighboring gene microRNA 205 Neighboring gene STARR-seq mESC enhancer starr_03484 Neighboring gene STARR-seq mESC enhancer starr_03485 Neighboring gene STARR-seq mESC enhancer starr_03487 Neighboring gene predicted gene, 31870 Neighboring gene predicted gene, 21362

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_166150.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL365334
      Related
      ENSMUST00000252669.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      193188768..193192518 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)