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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_047147.1 RefSeqGene
- Range
-
5050..36046
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001320227.2 → NP_001307156.1 60S ribosomal export protein NMD3 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC108738, AK225664, DB480542
- Consensus CDS
-
CCDS82870.1
- UniProtKB/TrEMBL
- B3KT11, C9JA08
- Related
- ENSP00000417559.1, ENST00000472947.5
- Conserved Domains (3) summary
-
- COG1499
Location:9 → 388
- NMD3; NMD protein affecting ribosome stability and mRNA decay [Translation, ribosomal structure and biogenesis]
- pfam04981
Location:17 → 246
- NMD3; NMD3 family
- cl00266
Location:379 → 521
- HGTP_anticodon; HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for ...
-
NM_015938.5 → NP_057022.2 60S ribosomal export protein NMD3 isoform 2
See identical proteins and their annotated locations for NP_057022.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC108738, BC013317
- Consensus CDS
-
CCDS3194.1
- UniProtKB/Swiss-Prot
- D3DNM7, Q96D46, Q9Y2Z6
- UniProtKB/TrEMBL
-
B3KT11
- Related
- ENSP00000307525.2, ENST00000351193.7
- Conserved Domains (1) summary
-
- pfam04981
Location:17 → 246
- NMD3; NMD3 family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
161221102..161253532
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005247511.3 → XP_005247568.1 60S ribosomal export protein NMD3 isoform X1
See identical proteins and their annotated locations for XP_005247568.1
- UniProtKB/Swiss-Prot
- D3DNM7, Q96D46, Q9Y2Z6
- UniProtKB/TrEMBL
-
B3KT11
- Conserved Domains (1) summary
-
- pfam04981
Location:17 → 246
- NMD3; NMD3 family
-
XM_005247512.2 → XP_005247569.1 60S ribosomal export protein NMD3 isoform X1
See identical proteins and their annotated locations for XP_005247569.1
- UniProtKB/Swiss-Prot
- D3DNM7, Q96D46, Q9Y2Z6
- UniProtKB/TrEMBL
-
B3KT11
- Related
- ENSP00000419004.1, ENST00000460469.1
- Conserved Domains (1) summary
-
- pfam04981
Location:17 → 246
- NMD3; NMD3 family
RNA
-
XR_007095682.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
163995873..164028302
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054346715.1 → XP_054202690.1 60S ribosomal export protein NMD3 isoform X1
- UniProtKB/Swiss-Prot
- D3DNM7, Q96D46, Q9Y2Z6
- UniProtKB/TrEMBL
-
B3KT11
-
XM_054346716.1 → XP_054202691.1 60S ribosomal export protein NMD3 isoform X1
- UniProtKB/Swiss-Prot
- D3DNM7, Q96D46, Q9Y2Z6
- UniProtKB/TrEMBL
-
B3KT11
RNA
-
XR_008486719.1 RNA Sequence