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    l(3)psg2 lethal (3) persistent salivary gland 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38630, updated on 9-Dec-2024

    Summary

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    Official Symbol
    l(3)psg2provided by FlyBase
    Official Full Name
    lethal (3) persistent salivary gland 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0035617
    Locus tag
    Dmel_CG5146
    See related
    AllianceGenome:FB:FBgn0035617
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Liang-1.47; CG5146; clone 1.47; Dmel\CG5146; psg2
    Summary
    Involved in several processes, including autophagic cell death; imaginal disc-derived leg morphogenesis; and response to ecdysone. Predicted to be active in cytoplasm and nucleus. Is expressed in embryonic/larval salivary gland. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See l(3)psg2 in Genome Data Viewer
    Location:
    64D4-64D5; 3-14 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (5583669..5590390)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (5576769..5583490)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene bc10 Neighboring gene small non-coding RNA 357 Neighboring gene Msr-110 Neighboring gene spook Neighboring gene Alkaline phosphatase 10 Neighboring gene Alkaline phosphatase 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic and Transcriptomic Associations Identify a New Insecticide Resistance Phenotype for the Selective Sweep at the Cyp6g1 Locus of Drosophila melanogaster. Battlay P, et al. G3 (Bethesda), 2016 Aug 9. PMID 27317781, Free PMC Article
    2. Identification of EMS-induced mutations in Drosophila melanogaster by whole-genome sequencing. Blumenstiel JP, et al. Genetics, 2009 May. PMID 19307605, Free PMC Article
    3. Rapid recombination mapping for high-throughput genetic screens in Drosophila. Sapiro AL, et al. G3 (Bethesda), 2013 Dec 9. PMID 24170736, Free PMC Article
    4. Genetic control of specificity to steroid-triggered responses in Drosophila. Ihry RJ, et al. Genetics, 2014 Mar. PMID 24374353, Free PMC Article
    5. Abundant conserved microRNA target sites in the 5'-untranslated region and coding sequence. Zhou X, et al. Genetica, 2009 Nov. PMID 19578934

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in autophagic cell death IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in imaginal disc-derived leg morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of programmed cell death IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to ecdysone IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    lethal (3) persistent salivary gland 2
    Names
    CG5146-PA
    l(3)psg2-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      5583669..5590390
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139717.3 → NP_647974.1  lethal (3) persistent salivary gland 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647974.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VRM6
      Related
      FBpp0076793
      Conserved Domains (1) summary
      pfam12871
      Location:374 → 450
      PRP38_assoc; Pre-mRNA-splicing factor 38-associated hydrophilic C-term
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95TK0 Q95TK0
    Q9VRM6 Q9VRM6

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