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    Phosphoribosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818106, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Phosphoribosyltransferase family protein
    Primary source
    TAIR:AT2G35390
    Locus tag
    AT2G35390
    See related
    Araport:AT2G35390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT2G35400; T32F12.23; T32F12_23
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (14895248..14897882, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
    2. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    3. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001036410.1
    NM_129091.4
    NM_179913.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ribose phosphate diphosphokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in ribonucleoside monophosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Phosphoribosyltransferase family protein
    NP_001031487.1
    • Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_181082.1
    • Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11485 Blast hits to 11226 proteins in 2803 species: Archae - 263; Bacteria - 6160; Metazoa - 635; Fungi - 723; Plants - 204; Viruses - 13; Other Eukaryotes - 3487 (source: NCBI BLink).
    NP_850244.1
    • Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11486 Blast hits to 11227 proteins in 2803 species: Archae - 263; Bacteria - 6160; Metazoa - 635; Fungi - 723; Plants - 205; Viruses - 13; Other Eukaryotes - 3487 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14895248..14897882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336555.1 → NP_001325018.1  Phosphoribosyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYX1, A0A178WGP1
      Conserved Domains (1) summary
      PLN02369
      Location:51 → 352
      PLN02369; ribose-phosphate pyrophosphokinase

    2. NM_179913.3 → NP_850244.1  Phosphoribosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850244.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q42581, Q67XL7, Q67YH7, Q84LR8, Q8GUH0
      UniProtKB/TrEMBL
      A0A178W087, A0A178WGP1, A0A5S9X4E3
      Conserved Domains (1) summary
      PLN02369
      Location:102 → 403
      PLN02369; ribose-phosphate pyrophosphokinase

    3. NM_129091.4 → NP_181082.1  Phosphoribosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181082.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYX1, A0A178WGP1
      Conserved Domains (1) summary
      PLN02369
      Location:51 → 352
      PLN02369; ribose-phosphate pyrophosphokinase

    4. NM_001036410.1 → NP_001031487.1  Phosphoribosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031487.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IJW3
      Conserved Domains (3) summary
      cd06223
      Location:252 → 343
      PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain
      PLN02369
      Location:102 → 343
      PLN02369; ribose-phosphate pyrophosphokinase
      pfam13793
      Location:93 → 209
      Pribosyltran_N; N-terminal domain of ribose phosphate pyrophosphokinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q42581.2

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