VPS45 vacuolar protein sorting 45 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: VPS45
Official Full Name: vacuolar protein sorting 45
Primary source: TAIR:AT1G77140
Locus tag: AT1G77140
See related: Araport:AT1G77140
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATVPS45; BEN2; bfa-visualized endocytic trafficking defective 2; T14N5.2; T14N5_2; vacuolar protein sorting 45
Summary: A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face.
NEW: Try the new Gene table
Try the new Transcript table

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

Submit: New GeneRIF Correction

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

NM_106364.2

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within intracellular protein transport	IGI Inferred from Genetic Interaction more info	PubMed
involved_in intracellular protein transport	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in pollen germination	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in positive regulation of cell growth	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of auxin polar transport	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of root morphogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of vesicle fusion	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in vesicle-mediated transport	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in Golgi apparatus	ISM Inferred from Sequence Model more info
part_of SNARE complex	IDA Inferred from Direct Assay more info	PubMed
located_in early endosome	IDA Inferred from Direct Assay more info	PubMed
located_in mitochondrion	HDA more info	PubMed
located_in plant-type vacuole membrane	IDA Inferred from Direct Assay more info	PubMed
located_in trans-Golgi network	IDA Inferred from Direct Assay more info	PubMed
located_in trans-Golgi network	NAS Non-traceable Author Statement more info

NP_565150.1

vacuolar protein sorting 45 (VPS45); CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: secretory 1A (TAIR:AT1G02010.1); Has 1795 Blast hits to 1777 proteins in 228 species: Archae - 0; Bacteria - 2; Metazoa - 694; Fungi - 525; Plants - 216; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink).