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    CBS domain protein with a domain protein (DUF21) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838595, updated on 18-Sep-2024

    Summary

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    Official Full Name
    CBS domain protein with a domain protein (DUF21)
    Primary source
    TAIR:AT1G03270
    Locus tag
    AT1G03270
    See related
    Araport:AT1G03270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15K9.13; F15K9_13
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (799115..802625)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene R3H domain protein Neighboring gene SNARE associated Golgi protein family Neighboring gene Transcription factor TFIIE, alpha subunit Neighboring gene ELKS/Rab6-interacting/CAST family protein Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 1)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in magnesium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CBS domain protein with a domain protein (DUF21)
    NP_171826.2
    • CBS domain-containing protein with a domain of unknown function (DUF21); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT4G14240.1); Has 10325 Blast hits to 10105 proteins in 2459 species: Archae - 102; Bacteria - 7685; Metazoa - 330; Fungi - 275; Plants - 225; Viruses - 0; Other Eukaryotes - 1708 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      799115..802625
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100209.3 → NP_171826.2  CBS domain protein with a domain protein (DUF21) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171826.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I0U8, Q9ZVS8
      UniProtKB/TrEMBL
      A0A178W3C6, A0A5S9SDJ1
      Conserved Domains (1) summary
      COG1253
      Location:33 → 433
      TlyC; Hemolysin or related protein, contains CBS domains [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZVS8.2

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