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    NPQ7 antigen receptor-like protein (DUF565) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842853, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NPQ7
    Official Full Name
    antigen receptor-like protein (DUF565)
    Primary source
    TAIR:AT1G65420
    Locus tag
    AT1G65420
    See related
    Araport:AT1G65420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    NONPHOTOCHEMICAL QUENCHING 7; T8F5.20; T8F5_20
    Summary
    Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq6.
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    Genomic context

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    See NPQ7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (24297480..24298608, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene phloem protein 2 A5 Neighboring gene non-intrinsic ABC protein 11 Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene F-box/kelch-repeat protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutations in Arabidopsis YCF20-like genes affect thermal dissipation of excess absorbed light energy. Jung HS, et al. Planta, 2010 Mar. PMID 20087601, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_105216.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within nonphotochemical quenching IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    antigen receptor-like protein (DUF565)
    NP_564851.1
    • NONPHOTOCHEMICAL QUENCHING 7 (NPQ7); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF565 (InterPro:IPR007572); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF565) (TAIR:AT3G56830.1); Has 195 Blast hits to 195 proteins in 63 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24297480..24298608 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105216.5 → NP_564851.1  antigen receptor-like protein (DUF565) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564851.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80813, Q1ECF8, Q8L9U6
      UniProtKB/TrEMBL
      A0A5S9WPJ4, A0A654EL70
      Conserved Domains (1) summary
      pfam04483
      Location:137 → 197
      DUF565; Protein of unknown function (DUF565)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80813.2

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