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    SEP2 stress enhanced protein 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816733, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SEP2
    Official Full Name
    stress enhanced protein 2
    Primary source
    TAIR:AT2G21970
    Locus tag
    AT2G21970
    See related
    Araport:AT2G21970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7D8.29; F7D8_29; stress enhanced protein 2
    Summary
    stress enhanced protein 2 (SEP2) chlorophyll a/b-binding protein
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    Genomic context

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    See SEP2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (9356983..9357967, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene shikimate kinase 1 Neighboring gene ncRNA Neighboring gene SKP1 interacting partner 6 Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene HAUS augmin-like complex subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Light stress-regulated two-helix proteins in Arabidopsis thaliana related to the chlorophyll a/b-binding gene family. Heddad M, et al. Proc Natl Acad Sci U S A, 2000 Mar 28. PMID 10725357, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127766.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables chlorophyll binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to UV-A IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in cellular response to high light intensity IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within photosynthesis, light harvesting ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast thylakoid membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stress enhanced protein 2
    NP_565524.1
    • stress enhanced protein 2 (SEP2); Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9356983..9357967 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127766.3 → NP_565524.1  stress enhanced protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565524.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94F34, Q9SJ02
      UniProtKB/TrEMBL
      A0A178VQ84, A0A5S9X0F3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJ02.1

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