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    CESA9 cellulose synthase A9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816713, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CESA9
    Official Full Name
    cellulose synthase A9
    Primary source
    TAIR:AT2G21770
    Locus tag
    AT2G21770
    See related
    Araport:AT2G21770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cellulose synthase A9; CESA09; F7D8.9; F7D8_9
    Summary
    cellulose synthase, related to CESA6.
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    Genomic context

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    See CESA9 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (9284391..9289744)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Egg cell-secreted protein (DUF1278) Neighboring gene uncharacterized protein Neighboring gene ribonucleotide reductase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CELLULOSE SYNTHASE9 serves a nonredundant role in secondary cell wall synthesis in Arabidopsis epidermal testa cells. Stork J, et al. Plant Physiol, 2010 Jun. PMID 20335403, Free PMC Article
    2. Seed-specific down-regulation of Arabidopsis CELLULOSE SYNTHASE 1 or 9 reduces seed cellulose content and differentially affects carbon partitioning. Jayawardhane KN, et al. Plant Cell Rep, 2020 Jul. PMID 32314045
    3. The irregular xylem3 locus of Arabidopsis encodes a cellulose synthase required for secondary cell wall synthesis. Taylor NG, et al. Plant Cell, 1999 May. PMID 10330464, Free PMC Article
    4. Collapsed xylem phenotype of Arabidopsis identifies mutants deficient in cellulose deposition in the secondary cell wall. Turner SR, et al. Plant Cell, 1997 May. PMID 9165747, Free PMC Article
    5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Seed-specific down-regulation of Arabidopsis CELLULOSE SYNTHASE 1 or 9 reduces seed cellulose content and differentially affects carbon partitioning.
      Title: Seed-specific down-regulation of Arabidopsis CELLULOSE SYNTHASE 1 or 9 reduces seed cellulose content and differentially affects carbon partitioning.
    2. CESA9 mutants showed depletion of secondary cell wall synthesis in the radial cell wall.
      Title: CELLULOSE SYNTHASE9 serves a nonredundant role in secondary cell wall synthesis in Arabidopsis epidermal testa cells.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    NM_127746.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase (UDP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cellulose synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within plant-type cell wall biogenesis TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within seed coat development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cellulose synthase A9
    NP_179768.1
    • cellulose synthase A9 (CESA9); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: seed coat development, plant-type cell wall biogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A2 (TAIR:AT4G39350.1); Has 3186 Blast hits to 2819 proteins in 625 species: Archae - 9; Bacteria - 1125; Metazoa - 1; Fungi - 19; Plants - 1939; Viruses - 5; Other Eukaryotes - 88 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9284391..9289744
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127746.2 → NP_179768.1  cellulose synthase A9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179768.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SJ22
      UniProtKB/TrEMBL
      A0A5S9WZY8, A0A654EUZ2
      Conserved Domains (3) summary
      PLN02436
      Location:1 → 1087
      PLN02436; cellulose synthase A
      pfam14569
      Location:34 → 97
      zf-UDP; Zinc-binding RING-finger
      cl11394
      Location:517 → 838
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJ22.1

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