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    VHA-A2 vacuolar proton ATPase A2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816680, updated on 18-Sep-2024

    Summary

    Official Symbol
    VHA-A2
    Official Full Name
    vacuolar proton ATPase A2
    Primary source
    TAIR:AT2G21410
    Locus tag
    AT2G21410
    See related
    Araport:AT2G21410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3K23.17; F3K23_17; vacuolar proton ATPase A2
    Summary
    Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.
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    Genomic context

    See VHA-A2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    18
    Sequence:
    Chromosome: 2; NC_003071.7 (9162516..9168556)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Coatomer, alpha subunit Neighboring gene SHI-related sequence3 Neighboring gene IBR domain containing protein Neighboring gene Papain family cysteine protease Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_127713.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables diphosphate hydrolysis-driven proton transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vacuolar proton ATPase A2
    NP_179736.1
    • vacuolar proton ATPase A2 (VHA-A2); FUNCTIONS IN: ATPase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: cellular response to nutrient levels, ATP synthesis coupled proton transport; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, 116kDa subunit (InterPro:IPR002490); BEST Arabidopsis thaliana protein match is: vacuolar proton ATPase A3 (TAIR:AT4G39080.1); Has 2867 Blast hits to 2293 proteins in 720 species: Archae - 334; Bacteria - 1213; Metazoa - 663; Fungi - 202; Plants - 115; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9162516..9168556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127713.4NP_179736.1  vacuolar proton ATPase A2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179736.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56YA3, Q940S2, Q9SJT7
      UniProtKB/TrEMBL
      A0A178VR95, A0A5S9X035, A0A654EUT1
      Conserved Domains (1) summary
      pfam01496
      Location:40813
      V_ATPase_I; V-type ATPase 116kDa subunit family