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    MRL7-L Thioredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817741, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MRL7-L
    Official Full Name
    Thioredoxin superfamily protein
    Primary source
    TAIR:AT2G31840
    Locus tag
    AT2G31840
    See related
    Araport:AT2G31840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20M17.12; F20M17_12; Mesophyll-cell RNAi Library line 7-like
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    Genomic context

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    See MRL7-L in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (13537755..13539804, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ACT domain-containing small subunit of acetolactate synthase protein Neighboring gene Ankyrin repeat family protein Neighboring gene endonuclease/exonuclease/phosphatase family protein Neighboring gene uncharacterized protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NCP activates chloroplast transcription by controlling phytochrome-dependent dual nuclear and plastidial switches. Yang EJ, et al. Nat Commun, 2019 Jun 14. PMID 31201314, Free PMC Article
    2. SVR4 (suppressor of variegation 4) and SVR4-like: two proteins with a role in proper organization of the chloroplast genetic machinery. Powikrowska M, et al. Physiol Plant, 2014 Mar. PMID 24111559
    3. Two novel proteins, MRL7 and its paralog MRL7-L, have essential but functionally distinct roles in chloroplast development and are involved in plastid gene expression regulation in Arabidopsis. Qiao J, et al. Plant Cell Physiol, 2011 Jun. PMID 21515910
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128742.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within chloroplast organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Thioredoxin superfamily protein
    NP_180743.1
    • Thioredoxin superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28590.1); Has 792 Blast hits to 656 proteins in 115 species: Archae - 0; Bacteria - 18; Metazoa - 243; Fungi - 77; Plants - 88; Viruses - 24; Other Eukaryotes - 342 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13537755..13539804 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336349.1 → NP_001325041.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84RF5, Q9SKB6
      UniProtKB/TrEMBL
      A0A5S9X367
      Conserved Domains (1) summary
      cl00388
      Location:274 → 319
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

    2. NM_128742.3 → NP_180743.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180743.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84RF5, Q9SKB6
      UniProtKB/TrEMBL
      A0A5S9X367
      Conserved Domains (1) summary
      cl00388
      Location:274 → 319
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SKB6.1

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