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    Reticulon family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816017, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Reticulon family protein
    Primary source
    TAIR:AT2G15280
    Locus tag
    AT2G15280
    See related
    Araport:AT2G15280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F27O10.7; F27O10_7
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (6639973..6642353)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene PRKR-interacting protein Neighboring gene miscRNA Neighboring gene translocon at inner membrane of chloroplasts 21 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_127088.3
    NM_201738.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Reticulon family protein
    NP_179130.2
    • Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G19460.1); Has 1097 Blast hits to 1097 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 625; Fungi - 2; Plants - 455; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
    NP_973467.1
    • Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT3G19460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      6639973..6642353
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127088.3 → NP_179130.2  Reticulon family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179130.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EC00, Q6NPD8, Q9SHU8
      UniProtKB/TrEMBL
      A0A178VXE1, A0A5S9WY66
      Conserved Domains (1) summary
      pfam02453
      Location:14 → 169
      Reticulon; Reticulon

    2. NM_201738.1 → NP_973467.1  Reticulon family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973467.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXE1, A0A5S9WY66
      Conserved Domains (1) summary
      pfam02453
      Location:14 → 121
      Reticulon; Reticulon
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NPD8.1

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