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    ARI2 RING/U-box superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816106, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARI2
    Official Full Name
    RING/U-box superfamily protein
    Primary source
    TAIR:AT2G16090
    Locus tag
    AT2G16090
    See related
    Araport:AT2G16090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS ARIADNE 12; ARABIDOPSIS ARIADNE 2; ARI12; ARIADNE 12; ARIADNE 2; ATARI12; ATARI2; F7H1.11; F7H1_11
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    Genomic context

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    See ARI2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (6986830..6990080, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene plastid division2 Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001335465.1
    NM_001335466.1
    NM_001335467.1
    NM_127167.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RING/U-box superfamily protein
    NP_179206.2
    • ARIADNE 2 (ARI2); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      6986830..6990080 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335464.1 → NP_001323971.1  RING/U-box superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AYS1, A0A654EUJ7

    2. NM_127167.4 → NP_179206.2  RING/U-box superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179206.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84RR2, Q8VZE0, Q9XII0
      UniProtKB/TrEMBL
      A0A5S9WYM2, A0A654EUJ7
      Conserved Domains (4) summary
      smart00647
      Location:195 → 257
      IBR; In Between Ring fingers
      cd00162
      Location:127 → 173
      RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
      pfam01485
      Location:283 → 314
      IBR; IBR domain, a half RING-finger domain
      cl17238
      Location:126 → 174
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    3. NM_001335466.1 → NP_001323969.1  RING/U-box superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AYS5, A0A654EUJ7

    4. NM_001335465.1 → NP_001323970.1  RING/U-box superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AYL6, A0A654EUJ7

    5. NM_001335467.1 → NP_001323968.1  RING/U-box superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AYL7, A0A654EUJ7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84RR2.1

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