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    BSK4 kinase with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839253, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BSK4
    Official Full Name
    kinase with tetratricopeptide repeat domain-containing protein
    Primary source
    TAIR:AT1G01740
    Locus tag
    AT1G01740
    See related
    Araport:AT1G01740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    brassinosteroid-signaling kinase 4; T1N6.15; T1N6_15
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    Genomic context

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    See BSK4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (272111..274930, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Neighboring gene adenylosuccinate synthetase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene actin depolymerizing factor 11 Neighboring gene denosine deaminases acting on tRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BSKs are partially redundant positive regulators of brassinosteroid signaling in Arabidopsis. Sreeramulu S, et al. Plant J, 2013 Jun. PMID 23496207
    2. A brassinosteroid-signaling kinase interacts with multiple receptor-like kinases in Arabidopsis. Xu P, et al. Mol Plant, 2014 Feb. PMID 24051702, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in brassinosteroid mediated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    kinase with tetratricopeptide repeat domain-containing protein
    NP_001184886.1
    • Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 3 (TAIR:AT4G00710.1).
    NP_171679.1
    • Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 3 (TAIR:AT4G00710.1); Has 33834 Blast hits to 33303 proteins in 1392 species: Archae - 10; Bacteria - 2383; Metazoa - 7709; Fungi - 204; Plants - 21978; Viruses - 102; Other Eukaryotes - 1448 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      272111..274930 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331300.1 → NP_001322177.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AT62, A0A5S9S398

    2. NM_001197957.2 → NP_001184886.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001184886.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HU55, Q9LQ82
      UniProtKB/TrEMBL
      A0A178WDH9, A0A5S9S398, A0A654E827
      Conserved Domains (3) summary
      PLN03088
      Location:380 → 473
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:379 → 403
      TPR; TPR repeat [structural motif]
      cl21453
      Location:70 → 310
      PKc_like; Protein Kinases, catalytic domain

    3. NM_001331301.1 → NP_001322178.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AT62, A0A5S9S398

    4. NM_001331302.1 → NP_001322176.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBE7, A0A1P8AT60, A0A384K8P4, A0A7G2DRP6

    5. NM_100057.2 → NP_171679.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171679.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4HU55, Q9LQ82
      UniProtKB/TrEMBL
      A0A178WDH9, A0A5S9S398, A0A654E827
      Conserved Domains (3) summary
      PLN03088
      Location:380 → 473
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:379 → 403
      TPR; TPR repeat [structural motif]
      cl21453
      Location:70 → 310
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4HU55.1

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