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    Acyl-CoA N-acyltransferases (NAT) superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844090, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Acyl-CoA N-acyltransferases (NAT) superfamily protein
    Primary source
    TAIR:AT1G77540
    Locus tag
    AT1G77540
    See related
    Araport:AT1G77540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5M16.13; T5M16_13
    Summary
    Encodes a H3/H4 histone acetyltransferase. Belongs to the GNAT family, whose many members are involved in histone acetylation and chromatin remodeling, and are important for the regulation of cell growth and development.
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (29137626..29138282, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene O-methyltransferase family protein Neighboring gene defensin-like protein Neighboring gene O-methyltransferase family protein Neighboring gene tubulin-tyrosine ligase Neighboring gene tRNA-Gln Neighboring gene Winged helix-turn-helix transcription repressor DNA-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of Arabidopsis thaliana At1g77540 protein, a minimal acetyltransferase from the COG2388 family. Tyler RC, et al. Biochemistry, 2006 Dec 5. PMID 17128971, Free PMC Article
    2. In-depth proteome analysis of Arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes. Reumann S, et al. Plant Physiol, 2009 May. PMID 19329564, Free PMC Article
    3. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. At1g77540 was found to adopt a fold similar to that of GCN5-related N-acetyltransferases
      Title: Structure of Arabidopsis thaliana At1g77540 protein, a minimal acetyltransferase from the COG2388 family.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_106403.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables histone acetyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Acyl-CoA N-acyltransferases (NAT) superfamily protein
    NP_565157.1
    • Acyl-CoA N-acyltransferases (NAT) superfamily protein; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G21770.1); Has 329 Blast hits to 329 proteins in 159 species: Archae - 6; Bacteria - 264; Metazoa - 8; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29137626..29138282 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106403.4 → NP_565157.1  Acyl-CoA N-acyltransferases (NAT) superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565157.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2HIN3, Q8LEN2, Q9CAQ2
      UniProtKB/TrEMBL
      A0A178W956, A0A5S9WV71, A0A7G2E3N9
      Conserved Domains (1) summary
      pfam14542
      Location:27 → 102
      Acetyltransf_CG; GCN5-related N-acetyl-transferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CAQ2.2

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