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    kxDL motif protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822561, updated on 18-Sep-2024

    Summary

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    Official Full Name
    kxDL motif protein
    Primary source
    TAIR:AT3G29130
    Locus tag
    AT3G29130
    See related
    Araport:AT3G29130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (11099603..11104073, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_113836.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    kxDL motif protein
    NP_001189998.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371).
    NP_189557.2
    • CONTAINS InterPro DOMAIN/s: Domain of unknown function KxDL (InterPro:IPR019371); Has 135 Blast hits to 135 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      11099603..11104073 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339007.1 → NP_001326300.1  kxDL motif protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHH2, A0A1I9LNV2

    2. NM_001339009.1 → NP_001326299.1  kxDL motif protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VK21, A0A654FCS9, Q9LVP5

    3. NM_001339008.1 → NP_001326297.1  kxDL motif protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VHH2, A0A1I9LNV2

    4. NM_001203069.1 → NP_001189998.1  kxDL motif protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189998.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4J1T2
      Conserved Domains (1) summary
      pfam10241
      Location:64 → 141
      KxDL; Uncharacterized conserved protein

    5. NM_001339010.1 → NP_001326298.1  kxDL motif protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VK21, A0A654FCS9, Q9LVP5

    6. NM_113836.2 → NP_189557.2  kxDL motif protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189557.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VK21, A0A654FCS9, Q9LVP5
      Conserved Domains (1) summary
      pfam10241
      Location:15 → 92
      KxDL; Uncharacterized conserved protein
    Nucleotide Protein
    Heading Accession and Version

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