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    Nucleotidylyl transferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822383, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleotidylyl transferase superfamily protein
    Primary source
    TAIR:AT3G27610
    Locus tag
    AT3G27610
    See related
    Araport:AT3G27610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (10225486..10228264, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene reverse transcriptase family protein Neighboring gene SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein Neighboring gene alternative oxidase 1C Neighboring gene cyclin-dependent kinase inhibitor SMR3-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001338894.1
    NM_001338895.1
    NM_001338896.1
    NM_001338897.1
    NM_001338898.1
    NM_001338899.1
    NM_001338900.1
    NM_001338901.1
    NM_113677.6

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleotidylyl transferase superfamily protein
    NP_001319657.1
    • Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT2G01220.2).
    NP_189398.1
    • Nucleotidylyl transferase superfamily protein; BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT2G01220.2); Has 420 Blast hits to 413 proteins in 52 species: Archae - 6; Bacteria - 25; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10225486..10228264 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113677.6 → NP_189398.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189398.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FGM4, Q84Q59, Q9LVX7
      Conserved Domains (1) summary
      cl00015
      Location:217 → 383
      nt_trans; nucleotidyl transferase superfamily

    2. NM_001338895.1 → NP_001325452.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAT2, A0A1I9LLA3

    3. NM_001338896.1 → NP_001325449.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAT2, A0A1I9LLA0

    4. NM_001338898.1 → NP_001325450.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAT2, A0A1I9LLA0

    5. NM_001338897.1 → NP_001325453.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAT2, A0A1I9LLA3

    6. NM_001338899.1 → NP_001325451.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAT2, A0A1I9LLA0

    7. NM_001338894.1 → NP_001319657.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IWL0, Q9LVX7

    8. NM_001338901.1 → NP_001325448.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAT2, A0A1I9LLA0

    9. NM_001338900.1 → NP_001325454.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAT2, A0A1I9LLA3
    Nucleotide Protein
    Heading Accession and Version

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