U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822500, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185)
    Primary source
    TAIR:AT3G28700
    Locus tag
    AT3G28700
    See related
    Araport:AT3G28700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (10759541..10762209)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene tRNA-Ala Neighboring gene pseudo Neighboring gene ATPase, V0/A0 complex, subunit C/D

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. Tan YF, et al. Plant Physiol, 2010 Feb. PMID 20018591, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001203066.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein-arginine omega-N symmetric methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding HDA PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185)
    NP_001189995.1
    • Protein of unknown function (DUF185); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788).
    NP_189511.2
    • Protein of unknown function (DUF185); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788); Has 3455 Blast hits to 3441 proteins in 877 species: Archae - 0; Bacteria - 1411; Metazoa - 158; Fungi - 104; Plants - 44; Viruses - 0; Other Eukaryotes - 1738 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10759541..10762209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113790.4 → NP_189511.2  NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189511.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XGJ7, A0A654FI28, Q1JPN1
      Conserved Domains (1) summary
      cl17173
      Location:82 → 471
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    2. NM_001338966.1 → NP_001326877.1  NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQL6, Q9LJI6

    3. NM_001203066.1 → NP_001189995.1  NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189995.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XGJ7, F4J0D4
      Conserved Domains (2) summary
      COG1565
      Location:82 → 435
      MidA; SAM-dependent methyltransferase, MidA family [General function prediction only]
      pfam02636
      Location:136 → 393
      Methyltransf_28; Putative S-adenosyl-L-methionine-dependent methyltransferase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.