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    coiled-coil protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838667, updated on 18-Sep-2024

    Summary

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    Official Full Name
    coiled-coil protein
    Primary source
    TAIR:AT1G20770
    Locus tag
    AT1G20770
    See related
    Araport:AT1G20770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2D10.26; F2D10_26
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (7215010..7216897, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RAD3-like DNA-binding helicase protein Neighboring gene Calcium-binding EF hand family protein Neighboring gene senescence-associated E3 ubiquitin ligase 1 Neighboring gene F-box family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_101929.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in vacuolar proton-transporting V-type ATPase complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    coiled-coil protein
    NP_173500.1
    • unknown protein; Has 59 Blast hits to 59 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7215010..7216897 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332464.1 → NP_001321937.1  coiled-coil protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASF3

    2. NM_101929.4 → NP_173500.1  coiled-coil protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173500.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WF12, Q9LM77
    Nucleotide Protein
    Heading Accession and Version

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