U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZIFL2 zinc induced facilitator-like 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823490, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ZIFL2
    Official Full Name
    zinc induced facilitator-like 2
    Primary source
    TAIR:AT3G43790
    Locus tag
    AT3G43790
    See related
    Araport:AT3G43790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    zinc induced facilitator-like 2
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZIFL2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    18
    Sequence:
    Chromosome: 3; NC_003074.8 (15655319..15660126)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene glutathione S-transferase tau 27 Neighboring gene calmodulin 7

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The major facilitator superfamily transporter ZIFL2 modulates cesium and potassium homeostasis in Arabidopsis. Remy E, et al. Plant Cell Physiol, 2015 Jan. PMID 25378686
    2. Nematode-induced changes of transporter gene expression in Arabidopsis roots. Hammes UZ, et al. Mol Plant Microbe Interact, 2005 Dec. PMID 16478044
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001339106.1
    NM_114247.4
    NM_202653.1
    NM_202654.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to nematode HEP PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc induced facilitator-like 2
    NP_189965.2
    • zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 22616 Blast hits to 21614 proteins in 2597 species: Archae - 368; Bacteria - 16981; Metazoa - 1046; Fungi - 2343; Plants - 376; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink).
    NP_974382.1
    • zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_974383.1
    • zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      15655319..15660126
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339105.1 → NP_001326438.1  zinc induced facilitator-like 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8E4, A0A7G2EQ13

    2. NM_114247.4 → NP_189965.2  zinc induced facilitator-like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189965.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8E4, A0A7G2EQ13
      Conserved Domains (2) summary
      cd06174
      Location:37 → 471
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:40 → 429
      MFS_1; Major Facilitator Superfamily

    3. NM_001339106.1 → NP_001326437.1  zinc induced facilitator-like 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8E4, A0A1I9LP99, A0A5S9XHI2, A0A7G2EQ13

    4. NM_202654.1 → NP_974383.1  zinc induced facilitator-like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974383.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EAQ5, Q9LZG8
      UniProtKB/TrEMBL
      A0A178V8E4, A0A7G2EQ13
      Conserved Domains (2) summary
      cd06174
      Location:37 → 437
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:40 → 429
      MFS_1; Major Facilitator Superfamily

    5. NM_202653.1 → NP_974382.1  zinc induced facilitator-like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974382.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EAQ5, Q9LZG8
      UniProtKB/TrEMBL
      A0A178V8E4, A0A7G2EQ13
      Conserved Domains (2) summary
      cd06174
      Location:37 → 437
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:40 → 429
      MFS_1; Major Facilitator Superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3EAQ5.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.