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    CYP71B38 cytochrome P450, family 71, subfamily B, polypeptide 38 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823550, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP71B38
    Official Full Name
    cytochrome P450, family 71, subfamily B, polypeptide 38
    Primary source
    TAIR:AT3G44250
    Locus tag
    AT3G44250
    See related
    Araport:AT3G44250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 71; polypeptide 38; polypeptide 38''; subfamily B
    Summary
    putative cytochrome P450
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    Genomic context

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    See CYP71B38 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (15948505..15950245, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene miscRNA Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene Pol polyprotein/retrotransposon

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450, family 71, subfamily B, polypeptide 38
    NP_190011.1
    • ''cytochrome P450, family 71, subfamily B, polypeptide 38'' (CYP71B38); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome p450 71b5 (TAIR:AT3G53280.1); Has 32929 Blast hits to 32671 proteins in 1674 species: Archae - 48; Bacteria - 3051; Metazoa - 12123; Fungi - 6922; Plants - 9690; Viruses - 3; Other Eukaryotes - 1092 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      15948505..15950245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114293.2 → NP_190011.1  cytochrome P450, family 71, subfamily B, polypeptide 38 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190011.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4J1W9, Q1PEI9, Q9LXM3
      UniProtKB/TrEMBL
      A0A654FDK3
      Conserved Domains (1) summary
      cl12078
      Location:27 → 497
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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