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    Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831137, updated on 18-Sep-2024

    Summary

    Official Full Name
    Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
    Primary source
    TAIR:AT5G12970
    Locus tag
    AT5G12970
    See related
    Araport:AT5G12970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T24H18.140; T24H18_140
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (4102115..4105414)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene proline-tRNA ligase (DUF1680) Neighboring gene proline-tRNA ligase (DUF1680) Neighboring gene Cell differentiation, Rcd1-like protein Neighboring gene CLAVATA3/ESR-RELATED 40 Neighboring gene glucan synthase-like 12

    General gene information

    NM_121300.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    colocalizes_with endoplasmic reticulum PubMed 
    located_in plasmodesma PubMed 

    General protein information

    Preferred Names
    Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
    NP_196801.1
    • Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tryptophan biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (TAIR:AT3G57880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4102115..4105414
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121300.3 → NP_196801.1  Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196801.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LXU2
      UniProtKB/TrEMBL
      A0A178U6S2, A0A5S9Y3Y8
      Conserved Domains (4) summary
      cd04019
      Location:202 → 351
      C2C_MCTP_PRT_plant; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      cd08378
      Location:41 → 165
      C2B_MCTP_PRT_plant; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      cd08379
      Location:363 → 486
      C2D_MCTP_PRT_plant; C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
      pfam08372
      Location:614 → 769
      PRT_C; Plant phosphoribosyltransferase C-terminal
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