uncharacterized protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: uncharacterized protein
Primary source: TAIR:AT5G58790
Locus tag: AT5G58790
See related: Araport:AT5G58790
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: MZN1.28
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 4

Sequence:: Chromosome: 5; NC_003076.8 (23744730..23745981)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

Orthologs from OrthoDB

NM_001161314.2

Supported by ESTs:

NM_001349606.1

Supported by ESTs:

NM_001349607.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: uncharacterized protein

NP_001154786.1

FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT3G47120.1); Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NP_001336503.1

unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NP_001336504.1

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

23744730..23745981

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001161314.2 → NP_001154786.1 uncharacterized protein AT5G58790 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001154786.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9YFI1, A0A654GCD2, F4KGC9
NM_001349606.1 → NP_001336503.1 uncharacterized protein AT5G58790 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

Q3E894
NM_001349607.1 → NP_001336504.1 uncharacterized protein AT5G58790 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

F4KGD0