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    CSLD2 cellulose-synthase like D2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831554, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CSLD2
    Official Full Name
    cellulose-synthase like D2
    Primary source
    TAIR:AT5G16910
    Locus tag
    AT5G16910
    See related
    Araport:AT5G16910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCSLD2; cellulose-synthase like D2; F2K13.60; F2K13_60
    Summary
    encodes a gene similar to cellulose synthase. Located in Golgi membranes.
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    Genomic context

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    See CSLD2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (5560607..5565660)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Exostosin family protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene Fasciclin-like arabinogalactan family protein Neighboring gene AAA-type ATPase family protein Neighboring gene carbon-sulfur lyase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtCSLD2 is an integral Golgi membrane protein with its N-terminus facing the cytosol. Zeng W, et al. Planta, 2008 Oct. PMID 18642024
    2. Mannan synthase activity in the CSLD family. Verhertbruggen Y, et al. Plant Signal Behav, 2011 Oct. PMID 21904114, Free PMC Article
    3. The cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development. Yin L, et al. Mol Plant, 2011 Nov. PMID 21471331
    4. Functional analysis of the cellulose synthase-like genes CSLD1, CSLD2, and CSLD4 in tip-growing Arabidopsis cells. Bernal AJ, et al. Plant Physiol, 2008 Nov. PMID 18768911, Free PMC Article
    5. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. the cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development
      Title: The cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development.
    2. Data show that the N-terminus of the Arabidopsis cellulose synthase-like D2 protein likely faces the cytosol.
      Title: AtCSLD2 is an integral Golgi membrane protein with its N-terminus facing the cytosol.
    3. CSLD2 is required during a later stage of hair development than CSLD3, and CSLD2 mutants produce root hairs with a range of abnormalities, with many root hairs rupturing late in development
      Title: Functional analysis of the cellulose synthase-like genes CSLD1, CSLD2, and CSLD4 in tip-growing Arabidopsis cells.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    NM_001343473.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase (UDP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cellulose synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables mannan synthase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellulose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within root hair elongation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in Golgi membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in endosome HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

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    Preferred Names
    cellulose-synthase like D2
    NP_001318575.1
    • cellulose-synthase like D2 (CSLD2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, response to cold, polysaccharide biosynthetic process, root hair elongation; LOCATED IN: Golgi apparatus, plasma membrane, integral to Golgi membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5560607..5565660
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343473.1 → NP_001318575.1  cellulose-synthase like D2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LFL0
      UniProtKB/TrEMBL
      A0A178UAL6, A0A5S9Y739, A0A7G2FEG6
      Conserved Domains (1) summary
      PLN02248
      Location:2 → 1145
      PLN02248; cellulose synthase-like protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LFL0.1

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