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    F-box family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842154, updated on 18-Sep-2024

    Summary

    Official Full Name
    F-box family protein
    Primary source
    TAIR:AT1G57790
    Locus tag
    AT1G57790
    See related
    Araport:AT1G57790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12K22.16; F12K22_16
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (21404342..21405956, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ECA1 gametogenesis family protein (DUF784) Neighboring gene heavy-metal-associated domain-containing protein Neighboring gene ncRNA Neighboring gene zinc finger (C3HC4-type RING finger) family protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_104574.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus  

    General protein information

    Preferred Names
    F-box family protein
    NP_564725.1
    • F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G56470.1); Has 543 Blast hits to 532 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 541; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21404342..21405956 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104574.3 → NP_564725.1  F-box family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564725.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFZ6, Q9FVS1
      UniProtKB/TrEMBL
      A0A178WN96, A0A5S9WSA3
      Conserved Domains (1) summary
      pfam12937
      Location:13 → 49
      F-box-like
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