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    PUP5 purine permease 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816956, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PUP5
    Official Full Name
    purine permease 5
    Primary source
    TAIR:AT2G24220
    Locus tag
    AT2G24220
    See related
    Araport:AT2G24220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPUP5; F27D4.13; F27D4_13; purine permease 5
    Summary
    Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
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    Genomic context

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    See PUP5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (10300032..10301787)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene terpene synthase 10 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new family of high-affinity transporters for adenine, cytosine, and purine derivatives in Arabidopsis. Gillissen B, et al. Plant Cell, 2000 Feb. PMID 10662864, Free PMC Article
    2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001335925.1
    NM_127983.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables purine nucleobase transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables purine nucleobase transmembrane transporter activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables purine nucleoside transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within purine nucleobase transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    purine permease 5
    NP_001318280.1
    • purine permease 5 (PUP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1).
    NP_179999.2
    • purine permease 5 (PUP5); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 1 (TAIR:AT1G28230.1); Has 506 Blast hits to 495 proteins in 68 species: Archae - 4; Bacteria - 41; Metazoa - 16; Fungi - 40; Plants - 347; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10300032..10301787
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335925.1 → NP_001318280.1  purine permease 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2H1ZE27, A0A654F0P9
      Conserved Domains (1) summary
      pfam16913
      Location:56 → 359
      PUNUT; Purine nucleobase transmembrane transport

    2. NM_127983.3 → NP_179999.2  purine permease 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179999.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUH3
      UniProtKB/TrEMBL
      A0A178VV71
      Conserved Domains (1) summary
      pfam16913
      Location:38 → 341
      PUNUT; Purine nucleobase transmembrane transport
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZUH3.2

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