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    NUDT3 nudix hydrolase homolog 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844308, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NUDT3
    Official Full Name
    nudix hydrolase homolog 3
    Primary source
    TAIR:AT1G79690
    Locus tag
    AT1G79690
    See related
    Araport:AT1G79690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    atnudt3; F20B17.11; F20B17_11; nudix hydrolase homolog 3
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    Genomic context

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    See NUDT3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    21
    Sequence:
    Chromosome: 1; NC_003070.9 (29985046..29990388)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Wall-associated kinase family protein Neighboring gene ncRNA Neighboring gene WALL ASSOCIATED KINASE (WAK)-LIKE 10 Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene ncRNA Neighboring gene Major facilitator superfamily protein Neighboring gene Eukaryotic aspartyl protease family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel plant enzyme with dual activity: an atypical Nudix hydrolase and a dipeptidyl peptidase III. Karačić Z, et al. Biol Chem, 2017 Jan 1. PMID 27467751, Free PMC Article
    2. Toward an interaction map of the two-component signaling pathway of Arabidopsis thaliana. Dortay H, et al. J Proteome Res, 2008 Sep. PMID 18642946
    3. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article
    4. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001334912.1
    NM_106618.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables dipeptidyl-peptidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    NOT enables isopentenyl-diphosphate delta-isomerase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in mitochondrion HDA PubMed 
    located_in plant-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    nudix hydrolase homolog 3
    NP_565218.1
    • nudix hydrolase homolog 3 (NUDT3); FUNCTIONS IN: dipeptidyl-peptidase activity, hydrolase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Peptidase M49, dipeptidyl-peptidase III (InterPro:IPR005317), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29985046..29990388
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106618.5 → NP_565218.1  nudix hydrolase homolog 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565218.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GY80, Q8L831, Q93ZN1, Q9MA07
      UniProtKB/TrEMBL
      A0A178WDC8, A0A654ES27
      Conserved Domains (1) summary
      PLN02791
      Location:1 → 772
      PLN02791; Nudix hydrolase homolog

    2. NM_001334912.1 → NP_001320544.1  nudix hydrolase homolog 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GY80, Q8L831, Q93ZN1, Q9MA07
      UniProtKB/TrEMBL
      A0A178WDC8, A0A654ES27
      Conserved Domains (1) summary
      PLN02791
      Location:1 → 772
      PLN02791; Nudix hydrolase homolog
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L831.1

    Gene LinkOut

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