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    NACA5 nascent polypeptide-associated complex subunit alpha-like protein 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840199, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NACA5
    Official Full Name
    nascent polypeptide-associated complex subunit alpha-like protein 5
    Primary source
    TAIR:AT1G33040
    Locus tag
    AT1G33040
    See related
    Araport:AT1G33040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9L11.19; F9L11_19; nascent polypeptide-associated complex subunit alpha-like protein 5
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    Genomic context

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    See NACA5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (11966423..11967843)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene O-methyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene NAC 014

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103037.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    part_of nascent polypeptide-associated complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nascent polypeptide-associated complex subunit alpha-like protein 5
    NP_564415.1
    • nascent polypeptide-associated complex subunit alpha-like protein 5 (NACA5); CONTAINS InterPro DOMAIN/s: Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: Nascent polypeptide-associated complex (NAC), alpha subunit family protein (TAIR:AT4G10480.2); Has 1445 Blast hits to 1356 proteins in 272 species: Archae - 13; Bacteria - 22; Metazoa - 643; Fungi - 256; Plants - 163; Viruses - 18; Other Eukaryotes - 330 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11966423..11967843
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103037.4 → NP_564415.1  nascent polypeptide-associated complex subunit alpha-like protein 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564415.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGC6, Q9MAN9
      UniProtKB/TrEMBL
      A0A178W5J2, A0A654EK30
      Conserved Domains (2) summary
      cd14358
      Location:172 → 208
      UBA_NAC_euk; UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and its homologs mainly found in eukaryotes
      pfam01849
      Location:67 → 120
      NAC; NAC domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LGC6.2

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