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    AMT1;4 ammonium transporter 1;4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828988, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AMT1;4
    Official Full Name
    ammonium transporter 1;4
    Primary source
    TAIR:AT4G28700
    Locus tag
    AT4G28700
    See related
    Araport:AT4G28700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ammonium transporter 1;4; F16A16.190; F16A16_190
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    Genomic context

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    See AMT1;4 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (14161594..14163342)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene L-tyrosine decarboxylase Neighboring gene uncharacterized protein Neighboring gene RmlC-like cupins superfamily protein Neighboring gene pfkB-like carbohydrate kinase family protein Neighboring gene Myosin family protein with Dil domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtAMT1;4, a pollen-specific high-affinity ammonium transporter of the plasma membrane in Arabidopsis. Yuan L, et al. Plant Cell Physiol, 2009 Jan. PMID 19073648, Free PMC Article
    2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_119012.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ammonium channel activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ammonium channel activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables ammonium channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within ammonium transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    ammonium transporter 1;4
    NP_194599.1
    • ammonium transporter 1;4 (AMT1;4); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: leaf whorl, sepal, male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11355 Blast hits to 11337 proteins in 2068 species: Archae - 224; Bacteria - 4683; Metazoa - 331; Fungi - 433; Plants - 496; Viruses - 0; Other Eukaryotes - 5188 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14161594..14163342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119012.2 → NP_194599.1  ammonium transporter 1;4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194599.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4PSH7, Q9SVT8
      UniProtKB/TrEMBL
      A0A178UUD8, A0A5S9XX64
      Conserved Domains (1) summary
      TIGR00836
      Location:52 → 478
      amt; ammonium transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SVT8.1

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