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    Polynucleotide adenylyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832434, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Polynucleotide adenylyltransferase family protein
    Primary source
    TAIR:AT5G23690
    Locus tag
    AT5G23690
    See related
    Araport:AT5G23690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQM1.4; MQM1_4
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (7987493..7990664)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene long chain base2 Neighboring gene Sterile alpha motif (SAM) domain-containing protein Neighboring gene ncRNA Neighboring gene coiled-coil protein Neighboring gene DNA binding / DNA-directed RNA polymerase Neighboring gene dual specificity protein phosphatase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_122274.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Polynucleotide adenylyltransferase family protein
    NP_197758.2
    • Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7987493..7990664
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122274.3 → NP_197758.2  Polynucleotide adenylyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197758.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G3I8, F4KE92, Q8VXU8
      Conserved Domains (1) summary
      TIGR01942
      Location:73 → 398
      pcnB; poly(A) polymerase
    Nucleotide Protein
    Heading Accession and Version

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