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    Leucine carboxyl methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834285, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Leucine carboxyl methyltransferase
    Primary source
    TAIR:AT5G42760
    Locus tag
    AT5G42760
    See related
    Araport:AT5G42760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MJB21.14; MJB21_14
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (17148808..17150451)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Sugar isomerase (SIS) family protein Neighboring gene BRI1 kinase inhibitor 1 Neighboring gene ncRNA Neighboring gene plasma membrane fusion protein Neighboring gene Maf-like protein Neighboring gene homeobox protein 27

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203525.1
    NM_123640.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Leucine carboxyl methyltransferase
    NP_001190454.1
    • Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213).
    NP_568611.2
    • Leucine carboxyl methyltransferase; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00027, methylltransferase (InterPro:IPR011610), Leucine carboxyl methyltransferase (InterPro:IPR007213); Has 1965 Blast hits to 1962 proteins in 270 species: Archae - 38; Bacteria - 1757; Metazoa - 32; Fungi - 3; Plants - 47; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17148808..17150451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203525.1 → NP_001190454.1  Leucine carboxyl methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190454.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U7W8, F4K328, Q93YR1
      Conserved Domains (1) summary
      pfam04072
      Location:54 → 236
      LCM; Leucine carboxyl methyltransferase

    2. NM_123640.3 → NP_568611.2  Leucine carboxyl methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568611.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U7W8, F4K327, Q93YR1
      Conserved Domains (1) summary
      pfam04072
      Location:58 → 240
      LCM; Leucine carboxyl methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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