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    Copper amine oxidase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840056, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Copper amine oxidase family protein
    Primary source
    TAIR:AT1G31690
    Locus tag
    AT1G31690
    See related
    Araport:AT1G31690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F27M3.11; F27M3_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (11343854..11347945)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene bystin-like protein Neighboring gene Copper amine oxidase family protein Neighboring gene Copper amine oxidase family protein Neighboring gene chitin synthase, putative (DUF1218)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Copper amine oxidase 8 regulates arginine-dependent nitric oxide production in Arabidopsis thaliana. Groß F, et al. J Exp Bot, 2017 Apr 1. PMID 28383668, Free PMC Article
    2. Developmental, hormone- and stress-modulated expression profiles of four members of the Arabidopsis copper-amine oxidase gene family. Fraudentali I, et al. Plant Physiol Biochem, 2020 Feb. PMID 31862580
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_102904.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables aliphatic amine oxidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables primary methylamine oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables quinone binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular arginine homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within nitric oxide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in putrescine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to jasmonic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to putrescine IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salicylic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to water deprivation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    Copper amine oxidase family protein
    NP_174450.2
    • Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11343854..11347945
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102904.3 → NP_174450.2  Copper amine oxidase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174450.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IAX0, Q9C6V8, Q9C6V9
      UniProtKB/TrEMBL
      A0A7G2DZD9
      Conserved Domains (4) summary
      PLN02566
      Location:26 → 660
      PLN02566; amine oxidase (copper-containing)
      pfam01179
      Location:244 → 663
      Cu_amine_oxid; Copper amine oxidase, enzyme domain
      pfam02727
      Location:27 → 113
      Cu_amine_oxidN2; Copper amine oxidase, N2 domain
      pfam02728
      Location:123 → 215
      Cu_amine_oxidN3; Copper amine oxidase, N3 domain
    Nucleotide Protein
    Heading Accession and Version

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