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    Tec tec protein tyrosine kinase [ Mus musculus (house mouse) ]

    Gene ID: 21682, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tecprovided by MGI
    Official Full Name
    tec protein tyrosine kinaseprovided by MGI
    Primary source
    MGI:MGI:98662
    See related
    Ensembl:ENSMUSG00000029217 AllianceGenome:MGI:98662
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable non-membrane spanning protein tyrosine kinase activity. Predicted to be involved in adaptive immune response; cell surface receptor signaling pathway; and regulation of platelet activation. Located in cell-cell junction. Is expressed in several structures, including central nervous system; extraembryonic component; gut; placenta; and retina. Orthologous to human TEC (tec protein tyrosine kinase). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in placenta adult (RPKM 4.6), spleen adult (RPKM 4.0) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Tec in Genome Data Viewer
    Location:
    5 C3.2; 5 38.44 cM
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (72913061..73025997, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (72755718..72868654, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene NIPA-like domain containing 1 Neighboring gene STARR-positive B cell enhancer ABC_E3582 Neighboring gene TXK tyrosine kinase Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:73152561-73152781 Neighboring gene STARR-positive B cell enhancer ABC_E4762 Neighboring gene STARR-positive B cell enhancer ABC_E8061 Neighboring gene STARR-positive B cell enhancer ABC_E10324 Neighboring gene STARR-positive B cell enhancer ABC_E8821 Neighboring gene SLAIN motif family, member 2 Neighboring gene predicted gene, 54302 Neighboring gene predicted gene, 54289

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (1)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone H2AXY142 kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone H3Y41 kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables non-membrane spanning protein tyrosine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables non-membrane spanning protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables non-membrane spanning protein tyrosine kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in B cell receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in B cell receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in T cell receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in adaptive immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in integrin-mediated signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of platelet activation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cell-cell junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    tyrosine-protein kinase Tec
    Names
    cytoplasmic tyrosine kinase, Dscr28C related
    protein tyrosine kinase TecI
    protein tyrosine kinase TecIIA
    protein tyrosine kinase TecIIB
    protein tyrosine kinase TecIII
    protein tyrosine kinase TecIV
    NP_001106931.1
    NP_001106932.1
    NP_001106935.1
    NP_038717.2
    XP_006503908.1
    XP_006503909.1
    XP_006503910.1
    XP_006503911.1
    XP_011239020.1
    XP_011239021.1
    XP_036020885.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001113460.2NP_001106931.1  tyrosine-protein kinase Tec isoform a

      See identical proteins and their annotated locations for NP_001106931.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same isoform (a).
      Source sequence(s)
      AC099698, AK139329, AK168460, CJ047828
      Consensus CDS
      CCDS51516.1
      UniProtKB/Swiss-Prot
      P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
      UniProtKB/TrEMBL
      Q3U436
      Related
      ENSMUSP00000071836.7, ENSMUST00000071944.13
      Conserved Domains (4) summary
      cd10396
      Location:239346
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:182236
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd01238
      Location:7148
      PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
      cd05114
      Location:364623
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    2. NM_001113461.2NP_001106932.1  tyrosine-protein kinase Tec isoform b

      See identical proteins and their annotated locations for NP_001106932.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. It encodes isoform b, which lacks an internal segment and is shorter than isoform a.
      Source sequence(s)
      AC099698, AK168452, AK168460, CJ047828
      Consensus CDS
      CCDS51515.1
      UniProtKB/TrEMBL
      Q3TH41, Q8CFK4
      Related
      ENSMUSP00000073509.7, ENSMUST00000073843.13
      Conserved Domains (6) summary
      cd10396
      Location:220324
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd01238
      Location:7148
      PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
      cd05114
      Location:342601
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
      pfam00169
      Location:5111
      PH; PH domain
      pfam07714
      Location:347596
      Pkinase_Tyr; Protein tyrosine kinase
      cl17036
      Location:182223
      SH3; Src Homology 3 domain superfamily
    3. NM_001113464.2NP_001106935.1  tyrosine-protein kinase Tec isoform a

      See identical proteins and their annotated locations for NP_001106935.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (a).
      Source sequence(s)
      AC099698, AK139329, CJ047828
      Consensus CDS
      CCDS51516.1
      UniProtKB/Swiss-Prot
      P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
      UniProtKB/TrEMBL
      Q3U436
      Related
      ENSMUSP00000109224.2, ENSMUST00000113594.8
      Conserved Domains (4) summary
      cd10396
      Location:239346
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:182236
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd01238
      Location:7148
      PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
      cd05114
      Location:364623
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    4. NM_013689.5NP_038717.2  tyrosine-protein kinase Tec isoform c

      See identical proteins and their annotated locations for NP_038717.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) uses an alternate splice site and lacks an alternate in-frame exon in the 5' coding region, and initiates translation at an alternate start codon, compared to variant 1. It encodes isoform c, which is shorter and has a distinct N-terminus, compared to isoform a.
      Source sequence(s)
      AC099698, AK133418, AK139329
      UniProtKB/TrEMBL
      Q3TH41
      Conserved Domains (5) summary
      cd10396
      Location:139243
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd05114
      Location:261520
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
      pfam07714
      Location:266515
      Pkinase_Tyr; Protein tyrosine kinase
      cl17036
      Location:101142
      SH3; Src Homology 3 domain superfamily
      cl17171
      Location:1167
      PH-like; Pleckstrin homology-like domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      72913061..73025997 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006503846.5XP_006503909.1  tyrosine-protein kinase Tec isoform X1

      See identical proteins and their annotated locations for XP_006503909.1

      UniProtKB/Swiss-Prot
      P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
      UniProtKB/TrEMBL
      Q3U436
      Conserved Domains (4) summary
      cd10396
      Location:239346
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:182236
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd01238
      Location:7148
      PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
      cd05114
      Location:364623
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    2. XM_011240719.4XP_011239021.1  tyrosine-protein kinase Tec isoform X1

      See identical proteins and their annotated locations for XP_011239021.1

      UniProtKB/Swiss-Prot
      P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
      UniProtKB/TrEMBL
      Q3U436
      Conserved Domains (4) summary
      cd10396
      Location:239346
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:182236
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd01238
      Location:7148
      PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
      cd05114
      Location:364623
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    3. XM_006503845.5XP_006503908.1  tyrosine-protein kinase Tec isoform X1

      See identical proteins and their annotated locations for XP_006503908.1

      UniProtKB/Swiss-Prot
      P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
      UniProtKB/TrEMBL
      Q3U436
      Conserved Domains (4) summary
      cd10396
      Location:239346
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:182236
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd01238
      Location:7148
      PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
      cd05114
      Location:364623
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    4. XM_011240718.3XP_011239020.1  tyrosine-protein kinase Tec isoform X1

      See identical proteins and their annotated locations for XP_011239020.1

      UniProtKB/Swiss-Prot
      P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
      UniProtKB/TrEMBL
      Q3U436
      Conserved Domains (4) summary
      cd10396
      Location:239346
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:182236
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd01238
      Location:7148
      PH_Btk; Bruton's tyrosine kinase pleckstrin homology (PH) domain
      cd05114
      Location:364623
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
    5. XM_006503848.5XP_006503911.1  tyrosine-protein kinase Tec isoform X3

      See identical proteins and their annotated locations for XP_006503911.1

      UniProtKB/Swiss-Prot
      P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
      Conserved Domains (4) summary
      cd10396
      Location:158265
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:101155
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd05114
      Location:283542
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
      cl17171
      Location:1167
      PH-like; Pleckstrin homology-like domain
    6. XM_006503847.2XP_006503910.1  tyrosine-protein kinase Tec isoform X2

      UniProtKB/Swiss-Prot
      P24604, Q9R1M9, Q9WVN0, Q9WVN1, Q9WVN2, Q9WVN3
      Conserved Domains (4) summary
      cd10396
      Location:206313
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:149203
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd05114
      Location:331590
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase
      cl17171
      Location:9115
      PH-like; Pleckstrin homology-like domain
    7. XM_036164992.1XP_036020885.1  tyrosine-protein kinase Tec isoform X4

      UniProtKB/TrEMBL
      I6L9F0
      Conserved Domains (3) summary
      cd10396
      Location:54161
      SH2_Tec_Itk; Src homology 2 (SH2) domain found in Tec protein, IL2-inducible T-cell kinase (Itk)
      cd11905
      Location:151
      SH3_Tec; Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)
      cd05114
      Location:179438
      PTKc_Tec_Rlk; Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase