U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    lncRNA:iab8 long non-coding RNA:iab8 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798430, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    lncRNA:iab8provided by FlyBase
    Official Full Name
    long non-coding RNA:iab8provided by FlyBase
    Primary source
    FLYBASE:FBgn0264857
    Locus tag
    Dmel_CR43261
    See related
    AllianceGenome:FB:FBgn0264857
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG31270; CR43261; Dmel\CR43261; iab; iab lncRNA; iab-8; iab-8 ncRNA; iab-8ncRNA; lncRNA-iab-8; miR-iab-8; mpa; msa
    Old locus tag
    Dmel_CG31270
    Summary
    Is expressed in embryonic abdominal segment 8; embryonic abdominal segment 9; male accessory gland secondary cell; and parasegment 15. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See lncRNA:iab8 in Genome Data Viewer
    Location:
    89E2-89E4; 3-59 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (16831116..16923231, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12656838..12748953, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long noncoding RNA: testis-specific 16 Neighboring gene abdominal A Neighboring gene MSA micropeptide Neighboring gene long non-coding RNA:iab4 Neighboring gene mir-iab-4 stem loop Neighboring gene mir-iab-8 stem loop Neighboring gene long non-coding RNA:CR43617 Neighboring gene Abdominal B Neighboring gene long non-coding RNA:CR46267 Neighboring gene Vacuolar H[+] ATPase M9.7 subunit d

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Following the intracellular localization of the iab-8ncRNA of the bithorax complex using the MS2-MCP-GFP system. Arib G, et al. Mech Dev, 2015 Nov. PMID 26277563
    2. Noncoding RNAs of the Ultrabithorax domain of the Drosophila bithorax complex. Pease B, et al. Genetics, 2013 Dec. PMID 24077301, Free PMC Article
    3. Genomic and functional conservation of lncRNAs: lessons from flies. Camilleri-Robles C, et al. Mamm Genome, 2022 Jun. PMID 35098341, Free PMC Article
    4. Repression of the Hox gene abd-A by ELAV-mediated Transcriptional Interference. Castro Alvarez JJ, et al. PLoS Genet, 2021 Nov. PMID 34780465, Free PMC Article
    5. abd-A regulation by the iab-8 noncoding RNA. Gummalla M, et al. PLoS Genet, 2012. PMID 22654672, Free PMC Article

    See all (43) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    • alternate names: iab-8 non-coding RNA; male-specific abdominal; infraabdominal-8; non-coding RNA iab8; iab-8; male specific abdominal
    • lncRNA:iab8-RA; Dmel\lncRNA:iab8-RA; CR43261-RA; Dmel\CR43261-RA
    • lncRNA:iab8-RB; Dmel\lncRNA:iab8-RB; CR43261-RB; Dmel\CR43261-RB
    • lncRNA:iab8-RC; Dmel\lncRNA:iab8-RC; CR43261-RC; Dmel\CR43261-RC
    • lncRNA:iab8-RD; Dmel\lncRNA:iab8-RD; CR43261-RD; Dmel\CR43261-RD
    • lncRNA:iab8-RE; Dmel\lncRNA:iab8-RE; CR43261-RE; Dmel\CR43261-RE
    • lncRNA:iab8-RF; Dmel\lncRNA:iab8-RF; CR43261-RF; Dmel\CR43261-RF
    • lncRNA:iab8-RG; Dmel\lncRNA:iab8-RG; CR43261-RG; Dmel\CR43261-RG
    • lncRNA:iab8-RH; Dmel\lncRNA:iab8-RH; CR43261-RH; Dmel\CR43261-RH
    • lncRNA:iab8-RI; Dmel\lncRNA:iab8-RI; CR43261-RI; Dmel\CR43261-RI
    • lncRNA:iab8-RJ; Dmel\lncRNA:iab8-RJ; CR43261-RJ; Dmel\CR43261-RJ
    • lncRNA:iab8-RK; Dmel\lncRNA:iab8-RK; CR43261-RK; Dmel\CR43261-RK
    • lncRNA:iab8-RL; Dmel\lncRNA:iab8-RL; CR43261-RL; Dmel\CR43261-RL

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      16831116..16923231 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_074022.1 RNA Sequence

      Status: REVIEWED

    2. NR_074021.1 RNA Sequence

      Status: REVIEWED

    3. NR_074020.1 RNA Sequence

      Status: REVIEWED

    4. NR_074019.1 RNA Sequence

      Status: REVIEWED

    5. NR_048414.1 RNA Sequence

      Status: REVIEWED

    6. NR_048415.2 RNA Sequence

      Status: REVIEWED

    7. NR_074018.1 RNA Sequence

      Status: REVIEWED

    8. NR_048412.2 RNA Sequence

      Status: REVIEWED

    9. NR_048413.2 RNA Sequence

      Status: REVIEWED

    10. NR_074023.1 RNA Sequence

      Status: REVIEWED

    11. NR_074024.1 RNA Sequence

      Status: REVIEWED

    12. NR_074025.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials