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    Obp56i Odorant-binding protein 56i [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 246667, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp56iprovided by FlyBase
    Official Full Name
    Odorant-binding protein 56iprovided by FlyBase
    Primary source
    FLYBASE:FBgn0043532
    Locus tag
    Dmel_CG30448
    See related
    AllianceGenome:FB:FBgn0043532
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    56i; 56I; anon-AE003794.2; CG30448; DmelObp56i; Dmel\CG30448; Obp-a
    Summary
    Predicted to enable odorant binding activity. Involved in sexual reproduction. Located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp56i in Genome Data Viewer
    Location:
    56E4-56E4; 2-90 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (19864717..19868714)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (15752222..15756219)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44570 Neighboring gene long non-coding RNA:CR44571 Neighboring gene long non-coding RNA:CR44460 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Association of polymorphisms in odorant-binding protein genes with variation in olfactory response to benzaldehyde in Drosophila. Wang P, et al. Genetics, 2007 Nov. PMID 17720903, Free PMC Article
    2. The seminal odorant binding protein Obp56g is required for mating plug formation and male fertility in Drosophila melanogaster. Brown NC, et al. Elife, 2023 Dec 21. PMID 38126735, Free PMC Article
    3. A large family of divergent Drosophila odorant-binding proteins expressed in gustatory and olfactory sensilla. Galindo K, et al. Genetics, 2001 Nov. PMID 11729153, Free PMC Article
    4. The odorant-binding proteins of Drosophila melanogaster: annotation and characterization of a divergent gene family. Graham LA, et al. Gene, 2002 Jun 12. PMID 12119098
    5. The 40-Year Mystery of Insect Odorant-Binding Proteins. Rihani K, et al. Biomolecules, 2021 Mar 30. PMID 33808208, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    located_in extracellular space HDA PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 56i
    Names
    CG30448-PA
    CG30448-PB
    Obp56i-PA
    Obp56i-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      19864717..19868714
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202051.1 → NP_001188980.1  Odorant-binding protein 56i, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188980.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4JD42, A9QID8
      Conserved Domains (1) summary
      pfam01395
      Location:5 → 110
      PBP_GOBP; PBP/GOBP family

    2. NM_166376.2 → NP_725929.1  Odorant-binding protein 56i, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725929.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A9QID8, A9QID9, Q4V3N1
      Related
      FBpp0085639
      Conserved Domains (1) summary
      pfam01395
      Location:25 → 121
      PBP_GOBP; PBP/GOBP family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4JD42 A0A0B4JD42
    Q4V3N1 Q4V3N1
    Q8MVX7 Q8MVX7

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