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    psd palisade [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33830, updated on 9-Dec-2024

    Summary

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    Official Symbol
    psdprovided by FlyBase
    Official Full Name
    palisadeprovided by FlyBase
    Primary source
    FLYBASE:FBgn0086265
    Locus tag
    Dmel_CG9050
    See related
    AllianceGenome:FB:FBgn0086265
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GM32356; CG9050; Dmel\CG9050; Fcp26Aa; TU-1
    Summary
    Involved in follicle cell microvillus organization and vitelline membrane formation involved in chorion-containing eggshell formation. Located in egg chorion and vitelline envelope. Is expressed in centripetal follicle cell; egg chamber; and oocyte. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See psd in Genome Data Viewer
    Location:
    26A4-26A4; 2-18 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (5963087..5964951, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (5963087..5964951, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Vitelline membrane 26Aac Neighboring gene Vitelline membrane 26Aa Neighboring gene uncharacterized protein Neighboring gene Uncoupling protein 4C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organization and expression of a second chromosome follicle cell gene cluster in Drosophila. Popodi E, et al. Dev Biol, 1988 Jun. PMID 3132408
    2. Palisade is required in the Drosophila ovary for assembly and function of the protective vitelline membrane. Elalayli M, et al. Dev Biol, 2008 Jul 15. PMID 18514182, Free PMC Article
    3. chickadee encodes a profilin required for intercellular cytoplasm transport during Drosophila oogenesis. Cooley L, et al. Cell, 1992 Apr 3. PMID 1339308
    4. Sulfation of eggshell components by Pipe defines dorsal-ventral polarity in the Drosophila embryo. Zhang Z, et al. Curr Biol, 2009 Jul 28. PMID 19540119, Free PMC Article
    5. Painting of Fourth and the X-Linked 1.688 Satellite in D. melanogaster is Involved in Chromosome-Wide Gene Regulation. Ekhteraei-Tousi S, et al. Cells, 2020 Jan 30. PMID 32019091, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in follicle cell microvillus organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in vitelline membrane formation involved in chorion-containing eggshell formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in egg chorion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in vitelline envelope IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    palisade
    Names
    CG9050-PA
    CG9050-PB
    follicle cell protein 26Aa
    psd-PA
    psd-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      5963087..5964951 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135130.3 → NP_608974.2  palisade, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608974.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IH21, Q9VMK3
      Related
      FBpp0078868

    2. NM_001273187.1 → NP_001260116.1  palisade, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260116.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IH21, Q9VMK3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IH21 Q8IH21
    Q9VMK3 Q9VMK3

    Gene LinkOut

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