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    CG13138 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34381, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13138provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032211
    Locus tag
    Dmel_CG13138
    See related
    AllianceGenome:FB:FBgn0032211
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13138
    Summary
    Predicted to enable chitin binding activity. Predicted to be involved in chitin-based cuticle development. Predicted to be active in chitin-based extracellular matrix. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13138 in Genome Data Viewer
    Location:
    31D1-31D1; 2-41 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10299977..10302018, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10299977..10302018, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene hand Neighboring gene Cylindromatosis Neighboring gene antisense RNA:CR44968 Neighboring gene no mitochondrial derivative Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tumor suppressor CYLD regulates JNK-induced cell death in Drosophila. Xue L, et al. Dev Cell, 2007 Sep. PMID 17765686
    2. Annotation and analysis of low-complexity protein families of Anopheles gambiae that are associated with cuticle. Cornman RS, et al. Insect Mol Biol, 2009 Oct. PMID 19754739, Free PMC Article
    3. Comparative Genomic Analyses Provide New Insights into the Evolutionary Dynamics of Heterochromatin in Drosophila. Caizzi R, et al. PLoS Genet, 2016 Aug. PMID 27513559, Free PMC Article
    4. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article
    5. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13138-PB
    CG13138-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10299977..10302018 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_164913.2 → NP_723559.2  uncharacterized protein Dmel_CG13138, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723559.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IPC2, Q9VL03
      Conserved Domains (1) summary
      pfam12314
      Location:188 → 279
      IMCp; Inner membrane complex protein

    2. NM_135528.2 → NP_609372.1  uncharacterized protein Dmel_CG13138, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609372.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IPC2, Q9VL03
      Related
      FBpp0079655
      Conserved Domains (1) summary
      pfam12314
      Location:188 → 279
      IMCp; Inner membrane complex protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VL03 Q9VL03

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